Aptamer applications

Sequences

Shows the sequence of RNA aptamers. We keep the U in the partial sequence because it is consistent with the sequence information in the fasta file. ( We provide the script could change T into U on the page).



Detailed information

This section displays


Name Target Sequence Length GC Content Affinity Year
CB3GA_Szostak_1 Cibacron Blue 3GA 5'GGGAGAAUUCCCGCGGCAGAAGCCCACCUGGCUUUGAACUCUAUGUUAUUGGGUGGGGGAAACUUAAGAAAACUACCACCCUUCAACAUUACCGCCCUUCAGCCUGCCAGCGCCCUGCAGCCCGGGAAGCUU3' 132 56.06% Kd~600µM 1990
RB4_Szostak_1 Reactive Blue 4 5'GGGAGAAUUCCCGCGGCGUUGGCCCAGGAUAAUAGGACGAAAUCCGAAAAAUCCGUACCCAACAUAGAACCCCCCCAGCGCUCACACGGACGCCCCAUUACGGCUAACCGAACGCCUGCAGCCCGGGAAGCUU3' 133 59.40% Kd<100µM 1990
T4 DNA pol_Gold_1 T4 DNA polymerase (gp43) 5'GAAUUGUGGUGUUGGCUCCCUAUAGUGAGUCGUAUUAAUAUUCCUUAGUUUUAUAGCCCAAUAACUCAGGCUCUUGAUUGGUUUUCAAUAGAGAUAUAAAAUUCUUUUCAUAG3' 113 33.63% Kd: 4.8 nM 1990
T4 DNA pol_Gold_2 T4 DNA polymerase (gp43) 5'GAAUUGUGGUGUUGGCUCCCUAUAGUGAGUCGUAUUAAUAUUCCUUAGUUUUAUAGCCCAGCAACCUAGGCUCUUGAUUGGUUUUCAAUAGAGAUAUAAAAUUCUUUUCAUAG3' 113 35.40% Kd: 4.8 nM 1990
HIV-1-RT_Gold_1 Human imunnodeficiency virus type 1 reverse transcriptase (HIV-1-RT) 5'GGGAGCAUCAGACUUUUAAUCUGACAAUCAAGAAUUCCGUUUUCAGUCGGGAAAAACUGAACAAUCUAUGAAAGAAUUUUAUAUCUCUAUUGAAAC3' 96 33.33% Kd: 5 nM 1992
HIV-1-RT_Gold_2 Human imunnodeficiency virus type 1 reverse transcriptase (HIV-1-RT) 5'GGGAGCAUCAGACUUUUAAUCUGACAAUCAAGAAUAUCUUCCGAAGCCGAACGGGAAAACCGGCAUCUAUGAAAGAAUUUUAUCUCUAUUGAAAC3' 95 38.95% Kd: 5 nM 1992
bFGF_Janjić_1 Basic fibroblast growth factor (bFGF) 5'GGGAGCUCAGAAUAAACGCUCAAAUCUCCUCCCGUCGAAGCUAACCUGGCCACUUCGACAUGAGGCCCGGAUCCGGC3' 77 58.44% Kd: 23 ± 3 nM 1993
bFGF_Janjić_2 Basic fibroblast growth factor (bFGF) 5'GGGAGCUCAGAAUAAACGCUCAAUCGGCGAGCUAACCAAGACACUCGCUGCACUUCGACAUGAGGCCCGGAUCCGGC3' 77 58.44% Kd: 5.0 ± 0.5 nM 1993
bFGF_Janjić_3 Basic fibroblast growth factor (bFGF) 5'GGGAGCUCAGAAUAAACGCUCAAACCCGCGGCCUCCGAAGCUAACCAGGACACUUCGACAUGAGGCCCGGAUCCGGC3' 77 61.04% Kd: 3.2 ± 0.5 nM 1993
bFGF_Janjić_4 Basic fibroblast growth factor (bFGF) 5'GGGAGCUCAGAAUAAACGCUCAAUGGGUGCUAACCAGGACACACCCACGCUGUUUCGACAUGAGGCCCGGAUCCGGC3' 77 58.44% Kd: 3.0 ± 0.5 nM 1993
bFGF_Janjić_5 Basic fibroblast growth factor (bFGF) 5'GGGAGCUCAGAAUAAACGCUCAAUGGGUGCUUAACCAGGCCACACCCUGCUGUUUCGACAUGAGGCCCGGAUCCGGC3' 77 58.44% Kd: 8.1 ± 0.8 nM 1993
bFGF_Janjić_6 Basic fibroblast growth factor (bFGF) 5'GGGAGAUGCCUGUCGAGCAUGCUGGGGGCAACGCUACAGACAAGUGCACCCAACGUAGCUAAACAGCUUUGUCGACGGG3' 79 58.23% Kd: exhibits biphasic binding, 0.51 ± 0.13 nM, 60 ± 52 nM 1993
bFGF_Janjić_7 Basic fibroblast growth factor (bFGF) 5'GGUGAAGGCAACGUAUAGGCAAGCACACUUCACC3' 34 52.94% Kd: ~0.19 ± 0.02 nM 1993
bFGF_Janjić_8 Basic fibroblast growth factor (bFGF) 5'GGGAGAUGCCUGUCGAGCAUGCUGCGUCAGAAGGCAACGUAUAGGCAAGCACACGUAGCUAAACAGCUUUGUCGACGGG3' 79 55.70% Kd: exhibits biphasic binding, 0.19 ± 0.02 nM, 49 ± 26 nM 1993
bFGF_Janjić_9 Basic fibroblast growth factor (bFGF) 5'GGGAGAUGCCUGUCGAGCAUGCUGAGGGUAACGUACUGGCAAGCUCACCUCAGCGUAGCUAAACAGCUUUGUCGACGGG3' 79 56.96% Kd: exhibits biphasic binding, 0.13 ± 0.03 nM, 510 ± 30 nM 1993
bFGF_Janjić_10 Basic fibroblast growth factor (bFGF) 5'GGGAGAUGCCUGUCGAGCAUGCUGAGGGUAACGUAUAGUCAAGACACCUCAAGUGUAGCUAAACAGCUUUGUCGACGGG3' 79 51.90% Kd: exhibits biphasic binding, 0.32 ± 0.07 nM, 140 ± 80 nM 1993
Rev-binding element_Ellington_1 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGGCGCAGCCUCAAUGAGGCUGGUGGUGCAAG3' 38 63.16% Kd: 1.9 ± 0.21* 1993
Rev-binding element_Ellington_2 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGGCGCAGCCUCAAUGAGGCUGGAGGUACAAG3' 38 60.53% Kd: 2.0* 1993
Rev-binding element_Ellington_3 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGGCACAGCCUCAAUGAGGCUGGUGGUACAAG3' 38 57.89% Kd: 1.2 ± 0.08* 1993
Rev-binding element_Ellington_4 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGACACAGCCUCAAUGAGGCUGCAGAUACAAG3' 38 52.63% Kd: 3.1 ± 0.26* 1993
Rev-binding element_Ellington_5 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGACACAGCUGCUGCAGAUACAAG3' 30 53.33% Kd: 2.1* 1993
Rev-binding element_Ellington_6 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGACACAGCCUCAAUGAGGCUGCAGAAACAAG3' 38 52.63% Kd: 2.7 ± 0.29* 1993
Rev-binding element_Ellington_7 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'GCUCUUGGCCGCAGCCUCAAUGAGGCUGAUGAUACAAG3' 38 55.26% Kd: 1.7* 1993
Rev-binding element_Ellington_8 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUACUCCGUACGCAAGUACGGUCGAGAAACAG3' 37 48.65% Kd: 4.3* 1993
Rev-binding element_Ellington_9 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUUUAGGACUCGUACGCAAGUACUGAGAUACUACAG3' 41 41.46% Kd: 2.4* 1993
Rev-binding element_Ellington_10 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUCCUGGCUCGUACGCAAGUACUAGAGACACAG3' 38 50.00% Kd: 3.6* 1993
Rev-binding element_Ellington_11 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACUCGUACGCAAGUACUGGAGAAACAG3' 34 47.06% Kd: 5.4 ± 0.05* 1993
Rev-binding element_Ellington_12 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGGACUCGUACGCAAGUACUUGAGAUACACG3' 37 45.95% Kd: 3.1* 1993
Rev-binding element_Ellington_13 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGUCUCGUACGCAAGUACUGAGAAACGACAG3' 36 47.22% Kd: 0.4* 1993
Rev-binding element_Ellington_14 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACUCCGUAUGCAAGUACGUUGAGCAACAG3' 36 47.22% Kd: 7.7, 9.5, 9.6* 1993
Rev-binding element_Ellington_15 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUAGACUCGUACGCAAGUACUCGAGAUAUACAG3' 38 42.11% Kd: 4.2* 1993
Rev-binding element_Ellington_16 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUUGGACUCCGUACGCAAGUACGUCGAGAUACAG3' 39 48.72% Kd: 1.9* 1993
Rev-binding element_Ellington_17 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGGACUCGUACGCAAGUACUGAGAAACACCG3' 37 48.65% Kd: 3.6* 1993
Rev-binding element_Ellington_18 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGACUCUUUGUACGCAAGUACAGAGUGAUACAG3' 39 41.03% Kd: 1.4* 1993
Rev-binding element_Ellington_19 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACGCGUACGCAAGUACUGUGAUACAG3' 33 48.48% Kd: 4.1* 1993
Rev-binding element_Ellington_20 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACGCGCUGGUACGCAAGUACGGCUGUGAUACAG3' 40 55.00% Kd: 3.9* 1993
Rev-binding element_Ellington_21 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUAGGUUGAGGUACGCAGACGGCUCUCUACAG3' 37 51.35% Kd: 1.9* 1993
Rev-binding element_Ellington_22 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUACUCUCGUACGCAAGUACGAUCGAGACACAG3' 38 47.37% Kd: 2.6* 1993
Rev-binding element_Ellington_23 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGAGCUCGUACGCAAGUACUCGAGGUACAG3' 36 50.00% Kd: 1.0* 1993
Rev-binding element_Ellington_24 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUUUGGAGGUACGCAAGUACGCGCUCACAG3' 35 51.43% Kd: 2.0* 1993
Rev-binding element_Ellington_25 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUACUCCUGUACGCAAGUACGGUUGAGACACAG3' 38 47.37% Kd: 3.2* 1993
Rev-binding element_Ellington_26 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUAUGAGAGUAGCAAGUACCGGACUCUACAG3' 36 44.44% Kd: 0.3* 1993
Rev-binding element_Ellington_27 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGCUCGUGUACGCAAGUACGCUUGAGGAACAG3' 38 50.00% Kd: 1.4* 1993
Rev-binding element_Ellington_28 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGUAGAGGUACGCAAGUACGCGCUCCACAG3' 36 52.78% Kd: 6.4, 6.5, 7.4, 9.7* 1993
Rev-binding element_Ellington_29 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUUUUUGAGGUACGCAAGUACGCGGCUCGACAG3' 38 50.00% Kd: 2.3* 1993
Rev-binding element_Ellington_30 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGUGUAGAGGUACGCAAGUAAGCGGCUCCACAG3' 37 51.35% Kd: 7.4* 1993
Rev-binding element_Ellington_31 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGUACGUUGUACGCAAGUACACGGGUUACAG3' 36 47.22% Kd: 0.7* 1993
Rev-binding element_Ellington_32 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGCUUCGUACGCAAGUAUGAUGAUACAG3' 33 42.42% Kd: 0.2* 1993
Rev-binding element_Ellington_33 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACAUCGUACGCAAGUACCUUGAAACAG3' 34 44.12% Kd: 4.6* 1993
Rev-binding element_Ellington_34 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACUUCGGUACGCAAUUACCGACUGACACAG3' 37 48.65% Kd: 2.4* 1993
Rev-binding element_Ellington_35 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCUGGACAUUUGUACGCAAGUACGUUUGAUACAG3' 36 38.89% Kd: 3.9* 1993
Rev-binding element_Ellington_36 Rev protein of HIV-1 (minimal Rev-binding element (RBE) found within the Rev Responsive Element (RRE)) 5'AUUCGGUAGCAUCUUGUACGCAAGUACGAGAGAGCAACAG3' 40 47.50% Kd: 0.5* 1993
Thrombin_Tasset_1 α-Thrombin, Human 5'GGGAGAUGCCUGUCGAGCAUGCUGCAUCCGGAUCGAAGUUAGUAGGCGGAGUGGUAGCUAAACAGCUUUGUCGACGGG3' 78 56.41% Kd: 37 ± 3.5 nM 1994
Thrombin_Tasset_2 α-Thrombin, Human 5'GGGAGAUGCCUGUCGAGCAUGCUGGUGCGGCUUUGGGCGCCGUGCUUGACGUAGCUAAACAGCUUUGUCGACGGG3' 75 61.33% Kd: 114 ± 2.0 nM 1994
Thrombin_Tasset_3 α-Thrombin, Human 5'UCCGGAUCGAAGUUAGUAGGCGGA3' 24 54.17% Kd: 9.3 ± 1.0 nM 1994
Thrombin_Tasset_4 α-Thrombin, Human 5'GAGCAUGCUGGUGCGGCUUUGGGCGCCGUGCUU3' 33 66.67% Kd: 155 ± 9.0 nM 1994
VB12_Szostak_1 Cyanocobalamin (vitamin B12) 5'GUCGGCCUAUCCGACAGGCACCGCGAGAGGACCAUUAUAGUGCGCAUAACCACUUCAGUGCGAGCAAAAAUUUGG3' 75 53.33% Kd: 88 ± 19 nM 1994
Co(III)(CN)6_Szostak_1 Cobinamide dicyanide 5'GUCGGCCUAUCCGACAGGCACCGCGAGAGGACCAUUAUAGUGCGCAUAACCACUUCAGUGCGAGCAAAAAUUUGG3' 75 53.33% Kd: 20 ± 9 μM 1994
Co(III)(CN)6_Szostak_2 Cobinamide dicyanide 5'AACACUAUCCGACUGGCACCGCCAGCGGACAAAUCCGGUGCGCAUAACCACCUCAGUGCGAGCAACGAUGGCCUUUCUACCCAAAGAUUUUCCUUGGUCAUUAGGAUCC3' 109 53.21% Kd: 8.8 ± 0.5 μM 1994
VB12_Szostak_2 Cyanocobalamin (vitamin B12) 5'AACACUAUCCGACUGGCACCGCCAGCGGACAAAUCCGGUGCGCAUAACCACCUCAGUGCGAGCAACGAUGGCCUUUCUACCCAAAGAUUUUCCUUGGUCAUUAGGAUCC3' 109 53.21% Kd: 320 ± 90 nM 1994
VB12_Szostak_3 Cyanocobalamin (vitamin B12) 5'GGAACCGGUGCGCAUAACCACCUCAGUGCGAGCAA3' 35 60.00% Kd: 88 ± 19 nM 1994
Co(III)(CN)6_Szostak_3 Cobinamide dicyanide 5'GGAACCGGUGCGCAUAACCACCUCAGUGCGAGCAA3' 35 60.00% Kd: 19.7 ± 8.7 μM 1994
Theophylline_Polisky_1 Bronchodilator theophylline 5'AGUGAUACCAGCAUCGUCUUGAUGCCCUUGGCAGCACU3' 38 52.63% Kd: 0.1 μM 1994
Theophylline_Polisky_2 Bronchodilator theophylline 5'AAGUGAUACCAGCAUCGUCUUGAUGCCCUUGGCAGCACUUCA3' 42 50.00% Kd: 0.6 μM 1994
Citrulline_Tocchini-Valentini_1 L-citrulline [L-(+)-2-amino-5-ureidovaleric acid] 5'GACGAGAAGGAGUGCUGGUUAUACUAGCGGUUAGGUCACUCGUC3' 44 52.27% Kd: 62-68 µM 1994
Arginine_Tocchini-Valentini_1 L-arginine 5'GACGAGAAGGAGCGCUGGUUCUACUAGCAGGUAGGUCACUCGUC3' 44 56.82% Kd: 56-76 µM 1994
PKC βII_Newton_1 Protein kinase C beta II (protein kinase C βII) 5'GGGAGAAUUCCGACCAGAGGCUUACAGAGUGUGCGUAAUGGCGUUCCCAAAUUCGGGCUGGGAACCGUUCGUUCGUGUUAUGCCCGUAGAUAUGGCAAGUCGCGGAUGCUCAGUACUACACUCUUGUGGUCAGUCACAUAUGUGCGUCUACAUGGAUCCUCA3' 162 51.85% Kd: 7 nM 1994
PKC βII_Newton_2 Protein kinase C beta II (protein kinase C βII) 5'GGGAGAAUUCCGACCAGAGGUUGUUAAGUGCGAGUUGUUUUACUCCGAUGAUACGGGGAGCGUUAGAGUCUUAUGACCUUGUUCUCCACGUCACUGUCCAAGUCACUCCGCGUCAUAGCAGUCGGAUCCUGUACAUAUGUGCGUCUACAUGGAUCCUCA3' 159 49.69% Kd: 7 nM 1994
VEGF_Janjić_1 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAACCGGUAGUCGCAUGGCCCAUCGCGCCCGGUUCGACAUGAGGCCCGGAUCCGGC3' 76 64.47% Kd1: 0.20 ± 0.02 nM Kd2: 42 ± 30 nM 1994
VEGF_Janjić_2 Vascular Endothelial Growth Factor (VEGF) 5'GGCCGGUAGUCGCAUGGCCCAUCGCGCCCGG3' 31 77.42% Kd1: 0.42 ± 0.04 nM Kd2: 182 ±94 nM 1994
VEGF_Janjić_3 Vascular Endothelial Growth Factor (VEGF) 5'GGAAGCUUGAUGGGUGACACACGUCAUGCCGAGCU3' 35 57.14% Kd1: 0.48 ± 0.04 nM Kd2: 82 ± 23 nM 1994
VEGF_Janjić_4 Vascular Endothelial Growth Factor (VEGF) 5'GGAAGGGAACCUGCGUCUCGGCACCUUCG3' 29 65.52% Kd1: 1.1 ±0.2 nM Kd2: 180 ± 160 nM 1994
VEGF_Janjić_5 Vascular Endothelial Growth Factor (VEGF) 5'GGUCAACGGUUGAGUCUGUCCCGUUCGAC3' 29 58.62% Kd1: 20 ± 1 nM 1994
VEGF_Janjić_6 Vascular Endothelial Growth Factor (VEGF) 5'GGCUCAAUAGUUGGAGGCCUGUCCUCGCCGUAGAGC3' 36 61.11% Kd1:1.8 ±0.4 nM Kd2: 31 ± 10 nM 1994
VEGF_Janjić_7 Vascular Endothelial Growth Factor (VEGF) 5'GGAACGGUUCUGUGUGUGGACUAGCCGCGGCCGUU3' 35 62.86% Kd1: 1.4 ±0.2 nM Kd2: 181 ± 57 nM 1994
VEGF_Janjić_8 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAAAGCUUGAUGGGUGACACACGUCAUGCCGAGCUUUUCGACAUGAGGCCCGGAUCCGGC3' 80 56.25% Kd1: 1.7 ±0.5 nM Kd2: 38 ±32 nM 1994
VEGF_Janjić_9 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAAGCAGACGAAGGGAACCUGCGUCUCGGCACCUUCGACAUGAGGCCCGGAUCCGGC3' 77 61.04% Kd1: 0.48 ± 0.07 nM Kd2: 21 ±5 nM 1994
VEGF_Janjić_10 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAAGCUUGAUGGGUGACACACGUCAUGCCGAGCUUCGACAUGAGGCCCGGAUCCGGC3' 77 58.44% Kd1: 0.19 ±0.09 nM Kd2: 10 ± 1 nM 1994
VEGF_Janjić_11 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAAGCUCAAUAGUUGGAGGCCUGUCCUCGCCGUAGAGCGUUCGACAUGAGGCCCGGAUCCGGC3' 83 59.04% Kd1: 0.82 ±0.2 nM Kd2: 21 ± 5 nM 1994
VEGF_Janjić_12 Vascular Endothelial Growth Factor (VEGF) 5'GGGAGCUCAGAAUAAACGCUCAAAACGGUUCUGUGUGUGGACUAGCCGCGGCCGUUUUCGACAUGAGGCCCGGAUCCGGC3' 80 58.75% Kd1: 0.14 ±0.04 nM Kd2: 11 ± 3 nM 1994
HTLV-1_Ellington_1 Tax protein of the human T-cell lymphomatic virus (HTLV-1) 5'GGGAGAAUUCCGACCAGAAGCUUGGACUUAUUCUCGAGCCUGCAUGUGCUAGUCGACGUUGUUUCUGCAUCUUGAAAGAUGGGGCUGUGGGUGUGGUUACUUCUACGCGGUAUGCACUGUACGCCCCAUAUGUGCGUCUACAUGGAUCCUCA3' 152 51.32% Kd: 70 nM 1995
Tobramycin_Rando_1 Tobramycin 5'GGGAGAAUUCCGACCAGAAGCUUCGUUUGGGGUCCCACAACACAGGUCUUUGCUGGUCAUAUAUGCGUGUCCUCUAGGAAGUGCAUAUGUGCGUCUACAUGGAUCCUCA3' 109 50.46% Kd: 4.3 ± 0.7 µM 1995
Tobramycin_Rando_2 Tobramycin 5'GGGAGAAUUCCGACCAGAAGCUUCUGGUUAGUUUUGCACAGUGGUCGAUGCUAGACUUGGUUUAGGUAAUGAGUCCAAUAGUCCAUAUGUGCGUCUACAUGGAUCCUCA3' 109 45.87% Kd: 3 ± 1 nM (high affinity component); 15.9 ± 0.7 µM (low affinity component) 1995
Tobramycin_Rando_3 Tobramycin 5'GGGAGAAUUCCGACCAGAAGCUUAGUAUAGCGAGGUUUAGCUACACUCGUGCUGAUCGUUUGGUACGGGACCUGCGUGUAGCCCAUAUGUGCGUCUACAUGGAUCCUCA3' 109 51.38% Kd: 2 ± 1 nM (high affinity component); 6.0 ± 0.4 µM (low affinity component) 1995
VPF/VEGF_Janjić_1 Vascular pemeability factor/vascular endothelial growth factor (VPF/VEGF) 5'GGGAGACAAGAAUAACGCUCAAACCCUGAUGGUAGACGCCGGGGUGCCGGAAUUCGACAGGAGGCUCACAACAGGC3' 76 57.89% NA 1995
HIV-1 integrase_Gold_1 Human immunodeficiency virus (HIV-1) integrase 5'GGGAGCUCAGAAUAAACGCUCAACCAGUCUUGUGGCUUUGAAAGAGAGGAGUGUUCGACAUGAGGCCCGGAUCCGGC3' 77 54.55% Kd: 12 nM or 2 nM 1995
Lividomycin_Ellington_1 Aminoglycoside lividomycin 5'GGGAAUGGAUCCACAUCUACGAAUUCAACGAGUGCAGUGGGAAACAGGUCUUUGGCUUCACUGCAGACUUGACGAAGCUU3' 80 48.75% NA 1996
Lividomycin_Ellington_2 Aminoglycoside lividomycin 5'GGGAAUGGAUCCACAUCUACGAAUUCCCGUCAAGUCCGGUAAGGUGCCUGACGUCUUCACUGCAGACUUGACGAAGCUU3' 79 51.90% NA 1996
Arginine_Famulok_1 L-arginine 5'GGAGCUCAGCCUUCACUGCAUGAUAAACCGAUGCUGGGCGAUUCUCCUGAAGUAGGGGAAGAGUUGUCAUGUAUGGGGGCACCACGGUCGGAUCCUG3' 97 55.67% Kd: 330 nM 1996
HIV-1 Rev_Ellington_1 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGCUAGGCAAUGUUUCGGUUGGAGUAAUCCGGUGGCUUGCCAUGAUUUACGUGAGUGCUGAUCCGUGAUGAGAUAGUAAGUGCAAUCU3' 110 45.45% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_2 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGCUAGGCAAUGUUUCGGUUGGAGUAAUCCGGUGGCUUGCCAUGAUUUACGUGAGUGCUGAUCCGUGAUGAGAUAGUAAGUGCAAUCU3' 110 45.45% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_3 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGUAUUCUCGGUGGUUUAAUCUGUGUAGAGGAGCUGACUCCUUUGGUUGGACUACGUGGAGGUUCUCUUAGAUAGUAAGUGCAAUCU3' 109 43.12% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_4 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUCAAGAAGUGGAAAUGCGCAGCGACCAUGAAACCUCGCAUGGUUCAUCGAUUGUUUGGAUAGUGUCUGUGUGAGAUAGUAAGUGCAAUCU3' 112 43.75% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_5 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGCAGUUAACCAAGCCUGCAUACUGGAUAGACGGCUUAUCCGACUGAAUGCCUCCCGAAAGGUGCAGUUAGAUAGUAAGUGCAAUCU3' 109 45.87% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_6 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGCGCAAACCCGAAGAAUGCCCAAAUUGAUCCAGAGCAAGUGGGAAUGAUAUAAAGUACCUGGUCCUGGAGAUAGUAAGUGCAAUCU3' 109 44.04% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_7 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUUCCAAACCCCGUUGAGAGUUGAUCCGGUCUAGGGAAUGGGAAAGAAGUAGGUAUCGAAGAGAAUGUACCCUAGAUAGUAAGUGCAAUCU3' 112 43.75% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_8 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUAGGACUCAAAUAUUCACGUUGACGUUGUCUUGGAGUGCUGAUCGGAAAACCAAUAUGAUUAAUGGGUCCUGAGAUAGUAAGUGCAAUCU3' 112 40.18% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_9 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUACGCAGCGACUGUGGUGGUGAGCGGUUGCGUAACUUGAUUUAAGCAAGUACUGCCAUGGCCGAACCUCUAAGAUAGUAAGUGCAAUCU3' 111 46.85% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_10 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUUCUAGUCAAGUUGCAAUCUCCGGUGGGGUGGUAACCGAGGAACACGUUUCGGGUGUAUAGGCUAGCGAGAUAGUAAGUGCAAUCU3' 108 47.22% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_11 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUUCUACCAGAGCGAGUGUGCUGAACGUUCUAAGGACGGGAUUGAAUCGAGAUGCGUAUACUAGGACCUUACGAGAUAGUAAGUGCAAUCU3' 112 44.64% Kd: 19-36 nM 1996
HIV-1 Rev_Ellington_12 Human immunodeficiency virus type 1 Rev (HIV-1 Rev) 5'GGGAGAUACCAGCUUAUUCAAUUGCUUGGUACCGAGCUCGGAUCCACGUAGUAACGGGCCGCCAGUGUCUGGAAUUCGGGUCGUUCUUGAGAUAGUAAGUGCAAUCU3' 107 50.47% Kd: 19-36 nM 1996
LS-Rg_Varki_1 L-selectin receptor globulin (LS-Rg) 5'UCGGGCGAGUCGUCUGUAACAACAAUCAAGGCGGGUUCACCGCCCCAGUAUGAGUACCGCAUCGUCCUCCC3' 71 59.15% Kd: 0.2 nM-3 nM 1996
LS-Rg_Varki_2 L-selectin receptor globulin (LS-Rg) 5'UCGGGCGAGUCGUCUGCGCGUAUGUGUGAAAGCGUGUGCACGGAGGCGUCUACAAUCCGCAUCGUCCUCCC3' 71 61.97% Kd: 3 nM-4 nM 1996
D-arginine_Ellington_1 D-arginine 5'CGGAUGGAAGGCGUGGUUAGAAUCCAAUAGCCCAUCCG3' 38 55.26% Kd: 135 ± 25 µM 1996
Arginine_Ellington_1 L-arginine 5'CGGAUGGAAGGCGUGGUUAGAAUCCAAUAGCCCAUCCG3' 38 55.26% Kd: 129 ± 18 µM 1996
ATP_Breaker_1 Adenosine triphosphate (ATP) 5'GGGCGACCCCAGUGCAUUGCGAAGAAACUGUGCGACUUCGGUCGCAGCAAACGUCGGC3" 5'GCCGUAGGUUGCCC3' 72 63.89% NA 1997
ATP_Breaker_2 Adenosine triphosphate (ATP) 5'UUUGUAGGCGACCUACCACUCUCGUGGCCCAGUGCAUUGCUGCGACCGAAGUCGCCAGUUUCUUCCCAAAUGUCGUCGCCAUCUCUUCC3' 89 56.18% NA 1997
HCV_Nishikawa_1 NS3 protease of hepatitis C virus (HCV) 5'GGGAACUCGAUGAAGCGAAUUCUGUUGGCGAACUGUACGCAAGUACACUGGAUGACAGGCCUAUCUAUCGGAUCCACG3' 78 51.28% Kd: 650 nM 1997
Dopamine_Tocchini-Valentini_1 Dopamine 5'GGGAAUUCCGCGUGUGCGCCGCGGAAGACGUUGGAAGGAUAGAUACCUACAACGGGGAAUAUAGAGGCCAGCACAUAGUGAGGCCCUCCUCCCAGUCCGUUCGGGAUCCUC3' 111 58.56% Kd: 2.8 µM 1997
Prion protein_Winnacker_1 Prion protein rPrP23-231 (rPrPc) fused to glutathione S-transferase (GST), RecombiNAt Syrian golden hamster 5'GGAGCUCAGCCUUCACUGCACGAAUUCGUUGUGCGGGAAUUUGAGGGACGAUGGGGAAGUGGGACGAAUGACUCAUUGCCGCGGUAGGGUUAGGCACCACGGUCGGAUCC3' 110 58.18% NA 1997
Prion protein_Winnacker_2 Prion protein rPrP23-231 (rPrPc) fused to glutathione S-transferase (GST), RecombiNAt Syrian golden hamster 5'GGAGCUCAGCCUUCACUGCAGCAAUGCGUUGUGUGGGAAUUUGAGGGACGAUGGGGAAGUGGGGACGAAUGACUCAUUGCCGCGGUAGGGUUGGCACCACGGUCGGAUCC3' 110 59.09% NA 1997
Prion protein_Winnacker_3 Prion protein rPrP23-231 (rPrPc) fused to glutathione S-transferase (GST), RecombiNAt Syrian golden hamster 5'GGAGCUCAGCCUUCACUGCUACCUUAGAGUAGGAGCGGGACGAGGGGUUGUUGGGACGUGGGUAUGAUCCAUACAUUAGGAAGCUGGUGAGCUGGCACCACGGUCGGAUCC3' 111 57.66% NA 1997
Cam_Gold_1 Chloramphenicol (Cam) 5'GGGAAAAGCGAAUCAUACACAAGAAUGAAAAGGGCUGGCGAGACAUAUCCGCUGGGCAAUCAGAUUCGGAGCCGCACCACCCUCGAAGUAGACAGGGCAUAAGGUAUUUAAUUCCAUA3' 118 48.31% Kd: 2.1 ± 0.3 µM 1997
Cam_Gold_2 Chloramphenicol (Cam) 5'GGGAAAAGCGAAUCAUACACAAGAAGAGCUUGACGGUCCCGAGAGUCGAGCCCAAGCUGACACUGGACCUUUGCGGACCACGUGUUGAUCGUCGGGGCAUAAGGUAUUUAAUUCCAUA3' 118 50.85% Kd: 8 ± 4 µM 1997
Cam_Gold_3 Chloramphenicol (Cam) 5'GGGAAAAGCGAAUCAUACACAAGAGGCACCAAAGCUGAAGUAGCGGGAUAACUCAAAUUACUUUAGGUGUAUGAAGGUGAAACUAGCAAUGAAGGGCAUAAGGUAUUUAAUUCCAUA3' 117 39.32% Kd: 7 ± 2 µM 1997
Cam_Gold_4 Chloramphenicol (Cam) 5'GGGCAUAAGGUAUUUAAUUCCAUACGGCAGACGAGCCUUGACGAGCCAAUCUACACUUGGCGAUGACCGAUGGGCCCCAGCUACUUCUGGCAGUUUCGAUUCGUUUGAUUCGGAUGCUCGGUAGCUCAACUCG3' 133 51.88% Kd: 25 ± 3 µM 1997
B52_Lis_1 B52 protein 5'GGGAGAAUUCAACUGCCAUCUAGGCAGGGUAACGAUCAACCUGGCGACAGCUGCCCUGCCGUCCAAGUACUACAAGCUUCUGGACUCGGU3' 90 55.56% Kd: 50nM 1997
B52_Lis_2 B52 protein 5'GGGAGAAUUCAACUGCCAUCUAGGCUGGUCAACCAGGCGACCGCCACCCGCGCGCGCAAUACCUAGUACUACAAGCUUCUGGACUCGGU3' 89 58.43% Kd: 20nM 1997
B52_Lis_3 B52 protein 5'GGGAGAAUUCAACUGCCAUCUAGGCUGCUCACGAGUCCAUGACCAGUACGAUCAACCAGGCGACAGUACUACAAGCUUCUGGACUCGGU3' 89 52.81% NA 1997
B52_Lis_4 B52 protein 5'GGGAGAAUUCAACUGCCAUCUAGGCCCAACUGCUAAGAAGCAUCCUGUACGAUCAACCCGGCGACAGUACUACAAGCUUCUGGACUCGGU3' 90 52.22% NA 1997
RNA loop_Schmidt_1 RNA stem-loop target (5'GCACGGTGCTGCTGAGATGCCCGT3') 5'GGGAGAAUUCCGACCAGAAGCUUCCGAAGCAUUCCGGCGUAGGGGUCUGUGCGCAAAACCAUCGGCCCUGGUGCCUAUGUGCGUCUACAUGGAUCCUCA3' 99 57.58% Kd: 70 ± 15 nM 1997
PNA pol II_Sentenac_1 RNA polymerase II (Pol II), Saccharomyces cerevisiae (S. cerevisiae) 5'GGGCCGCUAAGUCCUCGCUCACGAUACAGCACUGAUUGCGGUCGAGGUAGCUUGAUGGGCCACGCGCGACUCGGAUCCAC3' 80 62.50% NA 1997
K ras_Rando_1 Farnesylated peptide modeled after the carboxyl terminus of K ras 5'GGGAGAAUUCCGACCAGAAGCCUGCUCAGGGGUGGGUCGUAUAAUUAGCGUAGGGAGGUAGUGGAUGAGUAAGCCUGGGAUGUCAUAUGUGCGUCUACAUGGAUCCUCA3' 109 52.29% Kd: 139 ± 12 nM 1997
K ras_Rando_2 Farnesylated peptide modeled after the carboxyl terminus of K ras 5'GGGAGAAUUCCGACCAGAAGCCUGAGAUGUAUCGUUGCCGGGGAUGGGUGGGUGGUGUGAAGGCGAUCGUCAUCAGUUCGAGCCAUAUGUGCGUCUACAUGGAUCCUCA3' 109 55.05% Kd: 0.93 ± 0.05 μM 1997
HCV_Nishikawa_2 NS3 Protein of Hepatitis C Virus (HCV) 5'GGGAGAAUUCCGACCAGAAGGCUUGCUGUUGUUUCCCUGUUGUUUUGUCUCUCAACUUUAUUGUGGUAAAGAUCACUGGGUUGAUAAGGGCUAACUCUAAUUUGACUACAUGGUCGGACCAAUCAGUUCUUAUGGGAGAUGCAUAUGUGCGUCUACAUGGAUCCUCA3' 167 43.71% Kd: 120 ± 18 nM 1997
HCV_Nishikawa_3 NS3 Protein of Hepatitis C Virus (HCV) 5'GGGAGAAUUCCGACCAGAAGCUUAUACUGAAUUAAUCGCUACCGUGUCAUUGUACUUGGUAGUGUUGAUGGUUUGGGUCGCAUUUGGCUUGGCUUAUGGUUUUUUCACCCUACCUCUCAUUGACGCACUAGGCUCUCAUAUGUGCGUCUACAUGGAUCCUCA3' 162 45.68% NA 1997
SelB_Famulok_1 Special elongation factor SelB of Escherichia coli 5'GUCAGGAUGACUGCUGCGCUCGUGUCGUCACUGACCAUCUGUCGCAGGUCUGCGCACAUCGGUCGUUCACGGCCCAUCGGUUGCAGGUCUGCACCAAUCGGUCGGUAAUGGCGCAAUGAGCAUUACGGAUUCAAGC3' 136 58.09% binding ratio: 2.0 1997
Xanthine_Yokoyama_1 Xanthine (2,6-dioxypurine) 5'GGCACGUGUAUUACCCUAGUGGUCGACGUGCC3' 32 59.38% Kd: 3.3 µM 1998
Guanine_Yokoyama_1 Guanine 5'GGCACGUGUAUUACCCUAGUGGUCGACGUGCC3' 32 59.38% Kd: 1.3 µM 1998
APC_Nishikawa_1 Activated protein C (APC), Human 5'GGGAGAAUUCCGACCAGAAGCUUGUGAGACCAGCCGAGUGGUGUCUGGCUAUUCACUGGAGCGUGGGUGGAACCCCUGCGCACUCGUUUGGCUGUCCGGGCCUUCGGGCCGGGAUUAUCUCUUUGGGUUUUGUGAUUUGGUCAUAUGUGCGUCUACAUGGAUCCUCA3' 167 55.69% Ki: 83 ± 17 nM 1998
APC_Nishikawa_2 Activated protein C (APC), Human 5'GUGAGACCAGCCGAGUGGUGUCUGGCUAUUCACUGGAGCGUGGGUGGAACCCCUGCGCACUCGUUUGGCUGUCCGGGCCUUCGGGCCGGGAUUAUCUCU3' 99 62.63% Ki: 137 ± 14 nM 1998
Sulforhodamine B_Wilson_1 Fluorophore sulforhodamine B 5'GGAACACUAUCCGACUGGCACCUGUGCUCUAUAGCAGAAUGCUAACAUUAGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGUACAUCGGUGCCUUGGUCAUUAGGAUCCCG3' 113 52.21% Kd: 70 ± 10 nM 1998
Fluorescein_Wilson_1 Fluorescein 5'GGACGGCACCACGGUCGGAUCCGUGAGUUGUGACAAUUUAGCGGGUGGUAUUAGAGCCUACUGCCACAGCAAUAGGAUCGAUACAGAUCU3' 90 52.22% NA 1998
PTPase_Ellington_1 Protein tyrosine phosphatases (PTPase) ( Yop51*Δ162 ), Yersinia 5'GGGAAUGGAUCCACAUCUACGUAUUACUGCUGGUGACGAGGGCUAGACGACGUACCUUCACUGCAGACUUGACGAAGCUU3' 80 51.25% Kd: 28 ± 12 nM 1998
PTPase_Ellington_2 Protein tyrosine phosphatases (PTPase) ( Yop51*Δ162 ), Yersinia 5'GGGAGAUACCAGCUUAUUCAAUUCUGGCAAUGGGCUAUCCCAAGUGCUAGGCUUCAGGGAGCGAGGACCAGACGACGUACCUAACCCUAAGGUGAGAUAGUAAGUGCAAUCU3' 112 50.00% Kd: 18 ± 2.9 nM 1998
Raf-1 RBD_Yokoyama_1 Glutathione S-transferase-fused RBD (GST-RBD) Ras-binding domain (Raf-1 RBD) 5'GGGAGAUCAGAAUAAACGCUCAACUGAUCAAUGGCGUACAAUGGAUUCGUUCUCAUAACCAAAACCCUUACCCCUUGGACUGAUUCGACAUGAGGCCCCUGCAGGGCG3' 108 50.00% Kd: 332 ± 93 nM 1998
Raf-1 RBD_Yokoyama_2 Glutathione S-transferase-fused RBD (GST-RBD) Ras-binding domain (Raf-1 RBD) 5'GGGAGAUCAGAAUAAACGCUCAAUUGACUCAAUGGCGUACAAUGGAUUCGUUCUCAUAACCAAAACCCUUACCCCUUGGACUGUUCGACAUGAGGCCCCUGCAGGGCG3' 108 50.00% Kd: 332 ± 93 nM 1998
Tobramycin_Rando_4 Tobramycin 5'GGCUUAGUAUAGCGAGGUUUAGCUACACUCGUGCUGAGCC3' 40 52.50% Kd: 5.15 ± 1.52 nM 1998
bFGF_Ellington_1 RecombiNAt basic fibroblast growth factor (bFGF), Human 5'GGGAAUGGAUCCACAUCUACGAAUUCAAUCCCAAUGGCUUGAACUGCCAACGAACGUUCACUGCAGACUUGACGAAGCUU3' 80 47.50% Kd: 1.8 ± 0.8 nM 1998
Streptomycin_Schroeder_1 Streptomycin 5'GGAGCUCAGCCUUCACUGCACCCCUUUGUGGGAACGCAAAACUAAAGGAAGAUCUCAAGAAAGGUGGAUCGCAUUUGGACUUCUGCCCAGGGUGGCACCACGGUCGGAUCCAC3' 113 54.87% NA 1998
Streptomycin_Schroeder_2 Streptomycin 5'GGAUCGCAUUUGGACUUCUGCCCAGGGUGGCACCACGGUCGGAUCC3' 46 63.04% NA 1998
Streptomycin_Schroeder_3 Streptomycin 5'GGAGCUCAGCCUUCACUGCCAGACAGUAGAGGGAAGUGUGAGCUAUCACCUCAAGGAAAACGCUUCAGAAAGGGACUUAGGUGAUGAUAGUGUGGCACCACGGUCGGAUCCAC3' 113 53.10% NA 1998
Streptomycin_Schroeder_4 Streptomycin 5'AUCACCUCAAGGAAAACGCUUCAGAAAGGGACUUAGGUGAU3' 41 43.90% NA 1998
SelB_Famulok_2 SelB protein, Escherichia coli 5'GCGCUAAGUCCUCGCUCAGCCCAUAAGUUGUCCCAAGUCUUGGGCGCAAAUACAUCCCACGCGCGACUCGGAUCCG3' 76 59.21% NA 1999
tRNA_Tocchini-Valentini_1 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCUACGUAUCUUCAGGCGGUAACUAACUGUGCUGAGUCUAAUCUUUGUGAGGGACGGUAACAUAUGGUUCCCGCGUGGUCCGUUCGGGAUCCUC3' 109 53.21% Kd: 12 ± 1.2 nM 1999
tRNA_Tocchini-Valentini_2 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCAAGCCUGUCGUGUGAACCUUGGUAGUCUUCAGAUACCAUUCUAGCCACGAGAGACUACGACACUGCUCCGUCGCCCGUCCGUUCGGGAUCCUC3' 110 57.27% Kd: 26 ± 1.4 nM 1999
tRNA_Tocchini-Valentini_3 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCUCGGUCACGCAUCUUCACGUCGAAAGCUACAUCGGUCUGCUGACGGUGAUGGCAUUUGCGCGGCUUACGCCGGUCGUGGUCCGUUCGGGAUCCUC3' 112 60.71% binding efficiency:40% 1999
tRNA_Tocchini-Valentini_4 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCAGAGUGGCCGGGCCUCCAUUCGGGGGUUAUCUUCACCUACGGGCCCCACGCGUUAUUUAGUGUUGUACCGUAGGGCUGUGUCCGUUCGGGAUCCUC3' 113 60.18% binding efficiency:37% 1999
tRNA_Tocchini-Valentini_5 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCGGGUCUUCACAGACUUGGCAAUUACCAGAACAUGUGCCUGGUAUACGUCAAUACGUCUGGUGGUUAAUACCGCCGUGGUCCGUUCGGGAUCCUC3' 111 54.05% binding efficiency:41% 1999
tRNA_Tocchini-Valentini_6 Phenylalanine tRNA, Yeast 5'GGGAAUUCCGCGUGUGCAUCACGGGUGUAUGCAAGACUCAGCAGUGGGCCAUAUGGUCGGAUCGAGGCUAGCUAAGUCUCCCAAUUGCACCUUCGUGGUCCGUUCGGGAUCCUC3' 114 57.02% binding efficiency:16% 1999
CD18_Famulok_1 Cytoplasmic domain of CD18 5'GGGCGCUAAGUCCUCGCUCAUGCGCGUCCCAUGGGGUAUAGAGGGGUCGAAGUGGACGCGCGACUCGGAUCCUAC3' 75 64.00% Kd: between 500 and 1,000 nM 1999
CD18_Famulok_2 Cytoplasmic domain of CD18 5'GGGCGCUAAGUCCUCGCUCAUACAACGAGGGGUCGUGUAGGGAUGUAUGGGCUUGGACACACGCGCGACUCGGAUCCUAC3' 80 60.00% Kd: between 500 and 1,000 nM 1999
CD18_Famulok_3 Cytoplasmic domain of CD18 5'GGGCGCUAAGUCCUCGCUCACAAGGUGCAAUGCAAUAUGUGAGUGCGCCGCCCUUUCUCUCGCGCGACUCGGAUCCUAC3' 79 59.49% Kd: between 500 and 1,000 nM 1999
BPN_Kikuchi_1 Subtilisin BPN 5'GGGCGAAUUCGAGCUCGGGCCACUCGCUCAACACGGUAAGUAGAGACCUAGUGGUACAUAAAGGACUGCAGGCAUGCAAGCU3' 82 54.88% Ki: 2.5 µM 1999
Upstream of N-Ras_Jacquemin-Sablon_1 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUGAAUGAGAGAGAAGUAAAAGGUUGAUAUAAAUAGUGCCCA3' 57 42.11% Kd: 11 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_2 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUUCGAAAGAAAAGAGUAACUGGUUGAUAUAAAUAGUGCCCA3' 57 42.11% Kd: 10 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_3 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUAAGAGAAGAAGUACCCGAGCGUUGAUAUAAAUAGUGCCCA3' 57 47.37% Kd: 10 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_4 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUGAUGAAGUAAAAAGCGAUGAGUUGAUAUAAAUAGUGCCCA3' 57 42.11% Kd: 21 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_5 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUGGGAGGCAGAAAGGAAAAAGUGUUGAUAUAAAUAGUGCCCA3' 58 46.55% Kd: 13 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_6 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUAAGAAAGAACGGAACCAUGGUUGAUAUAAAUAGUGCCCA3' 56 44.64% Kd: 10 nM 1999
Upstream of N-Ras_Jacquemin-Sablon_7 Unr (Upstream of N-Ras) protein, Human 5'GGGCCACCAACGACAUUGAAAAAAAAACAAGAAGAAGGUUGAUAUAAAUAGUGCCCA3' 57 38.60% Kd: 8 nM 1999
VSG_Göringer_1 Trypanosome variant surface glycoprotein (VSG) 5'CGUCCAUCGGGUGGCCCGUGUCUGAGCGGGGACGGGGACUUGAGCGCCGCUGUCCGACUGAAUU3' 80 63.75% Kd: 60 ± 17 nM 1999
HIV-1 TAR_Toulmé_1 Trans-activation responsive (TAR) RNA element of HIV-1 5'GGUUACCAGCCUUCACUGCGGGCCACGAUUGUCGAGUCCAUCAACAGGUCCCAGACGUGUUGAACUGGAGAUCCCCCCGCACCACGGUCGGUCACAC3' 97 60.82% Kd: 30 nM 1999
HIV-1 TAR_Toulmé_2 Trans-activation responsive (TAR) RNA element of HIV-1 5'GGUUACCAGCCUUCACUGCACAGCCUCACUCCGGUCCCAGACGAAGUGACGGCACCAUGUGAGAAGCCCUACUGUGCCCGCACCACGGUCGGUCACAC3' 98 62.24% NA 1999
HIV-1 TAR_Toulmé_3 Trans-activation responsive (TAR) RNA element of HIV-1 5'GGUUACCAGCCUUCACUGCCCAGCGCAAUGACGACCCCCAGUCCCAGAUGGGAGGUCAUAGUCAUAGUCGGACUCACCGCGGCACCACGGUCGGUCACAC3' 100 62.00% NA 1999
HIV-1 TAR_Toulmé_4 Trans-activation responsive (TAR) RNA element of HIV-1 5'UCAACACGGUCCCAGACGUGUUGA3' 24 54.17% Kd: 32 ± 8 nM 1999
NF-kB_Maher_1 Human transcription factor NF-kB as a p50 homodimer (p502) 5'GGGAUAUCCUCGAGACAUAAGAAACAAGAUAGAUCCUGAAACUGUUUUAAGGUUGGCCGAUCUUCUGCUCGAGAAUGCAUGAAGCGUUCCAUAUUUUU3' 98 40.82% Kd: 1.34 ± 0.2 nM 1999
16s-rRNA region_Rando_1 Prokaryotic 16s-rRNA region 5'GGGAGAAUUCCGACCAGAAGCCUUCUCCUGCCGCGCGAUUUUACGCCGACAAGGGUGGCAUGAUGAUGUGUCUNUAUAUAGCAUAUGUGCGUCUACAUGGAUCCUCA3' 106 50.94% Kd: 1.236 ± 0.051 μM 2000
16s-rRNA region_Rando_2 Prokaryotic 16s-rRNA region 5'GGGAGAAUUCCGACCAGAAGCUUUUAGGGCGGGACUUUUGGCCGCAAAGGUUGGUGUGAGGGUUCUCAAUAAUGGCCCAAGCAUAUGUGCGUCUACAUGGAUCCUCA3' 107 51.40% Kd: 1.446 ± 0.088 μM 2000
16s-rRNA region_Rando_3 Prokaryotic 16s-rRNA region 5'GGGAGAAUUCCGACCAGAAGCGGCGUUCCGCAUCGGCAACUGGCGAGGAGUUGUAUUCGGCGGAAACGGGUUGAGGUCCGACAUAUGUGCGUCUACAUGGAUCCUCA3' 107 57.01% Kd: 1.665 ± 0.101 μM 2000
16s-rRNA region_Rando_4 Prokaryotic 16s-rRNA region 5'GGGAGAAUUCCGACCAGAAGCAGUGGAAGAGCCGGGUUGGGCAUAUGUGCGUCUACAUGGAUCCUCA3' 67 55.22% Kd: 2.946 ± 0.149 μM 2000
16s-rRNA region_Rando_5 Prokaryotic 16s-rRNA region 5'GGGAGAAUUCCGACCAGAAGCAGCGGAACGGCCGACUUCAACAUAUGUGCGUCUACAUGGAUCCUCA3' 67 53.73% Kd: 2.786 ± 0.188 μM 2000
Doxycyline_Famulok_1 Doxycyline 5'GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGUAUAUGACACCGAUGGGUAUUUGCUAGUAUCCUGCGUUCACGAAACUACCUCGAGACGU3' 102 50.00% Ki: 70 ± 20 nM 2000
Doxycyline_Famulok_2 Doxycyline 5'GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGGUACAGUCCAGGGUGAAGUUCCAAUUUUGAACACCUCCACGAAACUACCUCGAGACGU3' 101 51.49% Ki: 20 ± 5 nM 2000
Doxycyline_Famulok_3 Doxycyline 5'GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGGUUUGACCCUUGAUUCGAUGUAUUCGAAAGUGCUUGUUGACGAAACUACCUCGAGACGU3' 102 49.02% Ki: 25 ± 3 nM 2000
ATP_Ellington_1 Adenosine triphosphate (ATP) 5'GGAAGGCACGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGUGCCAGACCCAACCAGCCAGAGACC3' 84 63.10% Kd: 223 μM ± 20 μM 2000
ATP_Ellington_2 Adenosine triphosphate (ATP) 5'GGAAGGCACGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGCGCCAGACCCAACCAGCCAGAGACC3' 84 64.29% Kd: 165 μM ± 10 μM 2000
ATP_Ellington_3 Adenosine triphosphate (ATP) 5'GGGCGCGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGCGCCC3' 61 68.85% Kd: 175 μM ± 5 μM 2000
ATP_Ellington_4 Adenosine triphosphate (ATP) 5'GGAAGGCACGACCGCGCAAGAUACCGCCCGACAGCGGAAGGAGGGGCAUGCGGUCCAGGGCUGAGACCCAACCAGCCAGAGACC3' 84 67.86% NA 2000
Doxycyline_Famulok_4 Doxycyline 5'GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUCCUCGGUAAUCGCCGUAUCAAAAGUCGGAAUGGAGGGUCGACGAAACUACCUCGAGACGU3' 102 53.92% Ki: 50 ± 30 nM 2000
Pepocin_Ellington_1 Pepocin 5'GGGAGUCUGAAGUCGGACUCGAUAUCAAUUCACUUCAGACU3' 41 46.34% Kd: 17.9 ± 2.2 nM 2000
Pepocin_Ellington_2 Pepocin 5'GGGAAUGGAUCCACAUCUACGUAUUCAACCAAGUCUAAUGUCGGACUCGAUAUCAAUUCACUGCAGACUUGACGAAGCUU3' 80 43.75% Kd: 21.0 ± 2.0 nM 2000
Pepocin_Ellington_3 Pepocin 5'GGGAAUGGAUCCACAUCUACGUAUUCAGUCUAGGAAGCAGUCGGACUUGUUAUCAAUUCACUGCAGACUGUACGAAGCUU3' 80 45.00% Kd: 23.4 ± 2.3 nM 2000
cAMP_Breaker_1 Second messenger adenosine 3',5'-cyclic monophosphate (cAMP; 1) 5'GGAAGAGAUGGCGACUAAAACGACUUGUCGCGUGCUGCCCGCCUGUUCGCUUCUGCACCCCGGCGGUAAGCUUGGCAC3' 78 61.54% No reported 2000
cAMP_Breaker_2 Second messenger adenosine 3',5'-cyclic monophosphate (cAMP; 1) 5'GGAAGAGAUGGCGACUAAAACGACUUGUCGC3' 31 51.61% Kd: 10 μM 2000
R5 helix peptide_Okahata_1 R5 helix peptide 5'GGGAAACUGGAUGGAAUGGGCUCGAUGAAAAUCGACCGUGCGCUGAAAAGCACGCGAGGUCCUGCUGUAAGUGUGCCA3' 78 55.13% Kd: 10 nM 2000
R5 helix peptide_Okahata_2 R5 helix peptide 5'GGGAAACUGGAUGGAAUGGGCUCGCAAGGCCCCCUGAGCUGCACAAGUUCAUGGCGAGGUCCUGCUGUAAGUGUGCCA3' 78 58.97% Kd: 10 nM 2000
L-tyrosine_Tocchini-Valentini_1 L-tyrosine 5'GGGAAGCUUGUACAGGGGGCAGUCAACUCGUGCGAUCGUGAAAACGGGGCAAGAUGGCCUUACAGCGGUCAAUACGGGGGUCAUCAGAUAGGGAGGCCCUCCUGGUGGUCCGUUCGGGAUCCUC3' 124 59.68% Kd: 35 μM 2000
HCV NS3_Nishikawa_1 Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) 5'GGGAGAAUUCCGACCAGAAGCUUCGGGAUUUGAGGGUAGAAUGGGACUACCUUUCCUCUCUCCUUCCUCUUCU3' 73 50.68% Kd: 11.6 nM 2000
HCV NS3_Nishikawa_2 Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) 5'GGGAGAAUUCCGACCAGAAGUGCUCUUAGAAUGGGACUAAGACACGGGACCCUUUCCUCUCUCCUUCCUCUUCU3' 74 51.35% Kd: 6.3 nM 2000
HCV NS3_Nishikawa_3 Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) 5'GGGAGAAUUCCGACCAGAAGUACGACACGAUUGGGACGUGUCUAUGGGACCCUUUCCUCUCUCCUUCCUCUUCU3' 74 52.70% Kd: 8.9 nM 2000
HIV-1 Tat protein_Sugimoto_1 Tat protein from HIV-1 in the presence of Zn2+ ion 5'GGGAGAAUUCCGACCAGAAGCUUUGGUUAUCAUGUUUAUGCGUACGGGCGCCCAUAUGUGCGUCUACAUGGAUCCUCA3' 78 50.00% Kd: 0.31 μM 2000
WT1-ZFP_Romaniuk_1 WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) 5'GGGGCCACCAACGACAUUGACGAAUGCGUAAAUUGCUAGGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG3' 78 52.56% Kd: 87.4 ± 10.4 nM (WT1-ZFP) & 69.8 ± 8.4 nM (WT1[+KTS]-ZFP) 2001
WT1-ZFP_Romaniuk_2 WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) 5'GGGGCCACCAACGACAUUGAUAUGGUGACCACCCCGGCGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG3' 77 58.44% Kd: 13.8 ± 1.1 nM (WT1-ZFP) & 22.8 ± 2.3 nM (WT1[+KTS]-ZFP) 2001
WT1-ZFP_Romaniuk_3 WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) 5'GGGGCCACCAACGACAUUAUCACCCACCCCGAGCUGGCGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG3' 77 59.74% Kd: 17.8 ± 1.4 nM (WT1-ZFP) & 33.7 ± 4.4 nM (WT1[+KTS]-ZFP) 2001
sLeX_Yu_1 Sialyl Lewis X (sLeX)-expressing HL60 cells 5'CCGUAAUACGACUCACUAUAGGGGAGCUCGGUACCGAAUUCAAGGYACUCUGUGCUUGUCGAUGUGYAUUGAUGGCACUUUCGAGUCAACGAGUUGACAGRACAAGUAGUCAAGCUUUGCAGAGAGGAUCCUU3' 130 46.62% Kd: 0.085 nM and 3.3 nM via SPR 2001
tetracyclins_Schroeder_1 Class I typical tetracyclins 5'GCAUGCUAAUACGACUCACUAUAGGAGCUCAGCCUUCACUGCUGCUUAAAGCCUAAAACAUACCAGAUCGCCACCCGCGCUUUAAUCUGGAGAGGUGAAGAAUUCGACCACCUAGGCUGCACCACAAGCUU3' 131 49.62% Kd: ~1 μM 2001
tetracyclins_Schroeder_2 Class I typical tetracyclins 5'GGCCUAAAACAUACCAGAUUUCGAUCUGGAGAGGUGAAGAAUUCGACCACCUAGGCCGGU3' 60 50.00% NA 2001
Sephadex G-100_Engelke_1 Sephadex G-100 5'GGGAGUCGACCGACCAGAAGUCCGAGUAAUUUACGUUUUGAUACGGUUGCGGAACUUGCUAUGUGCGUCUACAUCUAGACUCAU3' 84 47.62% NA 2001
Thrombin_Sullenger_1 Thrombin, Human and porcine 5'GGGAGAGAGGAAGAGGGAUGGGGAACAAAGCUGAAGUACUUACCCAAGAUCAUCCCGAACGACAUAACCCAGAGGUCGAU3‘ 80 51.25% Kd: (Human: 2.8 ± 0.7 nM, Porcine: 83 ± 3 pM) 2001
Adenine_Maurel_1 Adenine 5'GGGAGAGGAUACUACACGUGAUAGGACGAUUAUCGAAAAUCACCAGAUUGGACCCUGGUUAACGAUCCAUUGCAUGUAGCAGAAGCUUCCG3' 91 47.25% Kd: 10 μM 2001
N6-adenine_Maurel_1 N6-adenine 5'GCGAAUUCGGAGAGGAUACUACACGUGAUAGGACGAUUAUCGAAAAUCACCAGAUUGGACCCUGGUUAACGAUCGGAAGCUUCUGCUACAUGCAAUGG3' 98 46.94% Kd: 10 μM 2002
HCV NS5B_Tomei_1 Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein 5'GGGAUGCUUCGGCAUCCCAGUCGAUGCGUAUCGCAGACUAUGUGGCUUCGGCCGUUGGAGUUGGUACCGCUUCGGCGGUACGUAAGCUUGGG3' 92 59.78% Kd: 16 ± 1.6 nM 2002
HCV NS5B_Tomei_2 Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein 5'GGGAUGCUUCGGCAUCCCCGAAGCCGCUAUGGACCAGUGGCGCGGCUUCGGCCCGACGGAGUGGUACCGCUUCGGCGGUACGUAAGCUUGGG3' 92 67.39% Kd: 1.5 ± 0.2 nM 2002
HCV NS5B_Tomei_3 Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein 5'GGGAUGCUUCGGCAUCCCGCUCUGGGCCGAAUAUGGACCACGUGGCUUCGGCCGCCAGCUCGUGUACCGCUUCGGCGGUACGUAAGCUUGGG3' 92 65.22% Kd: 10 ± 1.6 nM 2002
HCV NS5B_Tomei_4 Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein 5'CGAAGCCGCGCUAUGGACCAGUGGCGCGGCUUCG3' 34 70.59% Kd: >>200 nM 2002
Streptavidin_James_1 Streptavidin (SA) 5'AAUUAACCCUCACUAAAGGGAACUGUUGUGAGUCUCAUGUCGAACUUUCCUAGCGCACAUGCGACCUCUAUGCGUAAUACGAACGUUGACGGUUUGAGCGUCUAGUCUUGUCU3' 113 46.02% Kd: 7 ± 1.8 nM 2002
Neuropeptide Y_Famulok_1 Neuropeptide Y (NPY) 5'UCGGAGAAAGGGAAGCUUGAGCAGCAGGAGGGCCGGCGUUAGGGUUAGCGAGCCGAUUGAAAGAAGAAGGAACGAGCGUACGGAUCCGAUC3' 91 57.14% Kd: 0.37 μM 2002
C5 protein_Lee_1 Complement 5 protein (C5 protein) 5'CGUCCCUUCGCAACCCUUUAAGACUUGGGACCCUGCUCUU3' 40 55.00% Kd: 3.6 nM 2002
T. thermophilus RF1_Sprinzl_1 Release factor 1 (RF1), Thermus thermophilus (T. thermophilus) 5'GGGAGAGGAUACUACACGUGGUGUGUCAAGCCAGCCCUAGCUUGCUACCUGGGGGCCACUGACCUAUCCAUUGCAUGUAGCAGAAGCUUCCG3' 92 56.52% Kd: 2 x 10^-5 M 2002
T. thermophilus RF1_Sprinzl_2 Release factor 1 (RF1), Thermus thermophilus (T. thermophilus) 5'GGGAGAGGAUACUACACGUGGAAAGCUGAAAGUGAACGGAGUAUCACAGAGAACCCGGAAAAGUGGAGCCAUUGCAUGUAGCAGAAGCUUCCG3' 93 50.54% Kd: 2 x 10^-5 M 2002
NFATc DBD_Lee_1 Nuclear factor of activated T cells NFATc DNA binding domain (DBD) 5'GGGAGAGCGGAAGCGUGCUGGGCCUCUGUUCCCAAGGGAAUACYGGUCGUGUUGGAUCAGGUUGGCAUAACCCAGAGGUCGAUGGAUCCCCCC3' 92 60.87% Kd: 30 nM 2002
ATP_Burke_1 ATP 5'GGGAAAAGCGAAUCAUACACAAGACUUAGGAGGAAGAAACUGCACAAUACACAGAUCACGCGAAAGGAUAAUGCGUUCUGCGGAUUGUGGGCCUGGGCAUAAGGUAUUUAAUUCCAUA3' 118 44.07% NA 2002
ATP_Burke_2 ATP 5'GGGAAAAGCGAAUCAUACACAAGAGCAAUCUUGUUAACGGUGGAGGACGUAUGAAGGAAACUUAGGAAUCCCUGGUCCACGAAUCUGACCGUGUGGGCAUAAGGUAUUUAAUUCCAUA3' 118 44.07% NA 2002
ATP_Burke_3 ATP 5'GGGAAAAGCGAAUCAUACACAAGAAAGAACGUGAUGAAACGGUAACCAUAUCGCGUGCUCAAACUACAACGGAAAAUGAGGAGGAACGUGCUCAUGGGCAUAAGGUAUUUAAUUCCAUA3' 119 42.02% NA 2002
ATP_Burke_4 ATP 5'GGGAAAAGCGAAUCAUACACAAGAUUCACUCUACACCCAUGUCCCUAGGACUACAGGUUAACUACAAACCUCGAUCCGGUGCUUAGGGUGUGCUGG3' 100 0 NA 2002
E2F_Sullenger_1 E2F transcription factor 5'GUCGAUGUGAUAAGUAGGACGGAGGUGGUCGAU3' 33 51.52% Kd:2–4 nM 2002
Beta amyloid peptide_Fürste_1 Beta amyloid peptide (βA4(1–40)) 5'UUACCGUAAGGCCUGUCUUCGUUUGACAGCGGCUUGUUGACCCUCACACUUUGUACCUGCUGCCAA3' 66 51.52% Kd: 29–48 nM 2002
GTP_Szostak_1 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGAUGCUCAACAGUAGCCAACACGAGUACUGCUUCGGCAGUGGAACCAACGUAGUAUGUUUAGCAUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 122 47.54% Kd: 28 nM 2002
GTP_Szostak_2 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGACUUUCCGaAGuGGUUGGGCUGCUUCGGCAGuGuGAAAaCGGAGAGUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 105 50.48% Kd: 60–300 nM 2002
GTP_Szostak_3 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGAGAUAAGUUCCCAAGGCGGGUUGGAAGAGAUAUCAUAGGAGCUUGUCUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 106 47.17% Kd: 200 nM 2002
GTP_Szostak_4 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGAUCUAGCAGUUCAGGUAACCACGUAAGAUACGGGUCUAGAUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 99 46.46% Kd: 250 nM 2002
GTP_Szostak_5 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGAGGCAUCUAUAUACUGCUUCGGCAGGGAACUCUACUAAGCACCGAUGUCUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 108 48.15% Kd: 250 nM 2002
GTP_Szostak_6 Guanosine triphosphate (GTP) 5'GUGACGCGACUAGUUACGGAAAUGAAGAUAGUCGGGACCACUUCCCUGAGUCUGCUUCGGCAGUAACUCCAAGGAGAAAGGUCGUCAUUUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU3' 129 48.06% Kd: 500 nM 2002
Mitochondria_Adhya_1 Mitochondria 5'GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACCUUCUAGGCUGGGUCAUGUGACUGUAGCGG3' 72 51.39% Kd: 1 nM 2002
Mitochondria_Adhya_2 Mitochondria 5'GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACGGUAAGUCCCCGGGCAUGUGACUGUAGCGG3' 72 54.17% Kd: 0.46 nM 2002
Mitochondria_Adhya_3 Mitochondria 5'GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUAUGGUUUUCUGGGGUUUAUGUGACUGUAGCGG3' 72 47.22% Kd: 1.19 nM 2002
Mitochondria_Adhya_4 Mitochondria 5'GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACGGAUCAGAGUCUCCUAUGUGACUGUAGCGG3' 72 50.00% Kd: 0.1 nM 2002
NTS-1_Grisshammer_1 Rat neurotensin receptor NTS-1 5'UAAUACGACUACUAUAGGGAGGACGAUGCGGACAGAUACGGAACUACAGAGGUCAAUUACGGUGGCCACGCCAGACGACUCGCCCGA3' 87 54.02% Kd: 0.37 nM 2002
HCV NS5B_Lai_1 Hepatitis C virus NS5B protein (HCV NS5B protein) 5'GGGAGCUCAGAAUAAACGCUCAACUCCUAACCUCUCCGCAUGNGCUGUUACCUACACAGCUCAGCAUGCAUGAGGCCCGGAUCCGGC3' 86 56.98% Kd: 100 ± 6 (1/s) 2003
HCV NS5B_Lai_2 Hepatitis C virus NS5B protein (HCV NS5B protein) 5'GGGAGCUCAGAAUAAACGCUCAAUGUAGAGACUUUUCGAAAAGCGUGUUCCCAAUGAGUCUAUGCAUGCAUGAGGCCCGGAUCCGGC3' 87 50.57% Kd × 10e4: 1.0 ± 0.1 (1/s) 2003
HCV NS5B_Lai_3 Hepatitis C virus NS5B protein (HCV NS5B protein) 5'GGGAGCUCAGAAUAAACGCUCAAUGUAGGCUAGUACCGACCUGCGUGCCUCGCUCCUUUUCAUGCAUGCAUGAGGCCCGGAUCCGGC3' 87 57.47% Kd × 10e4: 100 ± 6 (1/s) 2003
Angiopoietin-2_Sullenger_1 Angiopoietin-2 (Ang2) 5'GGGAGGACGAUGCGGACUAGCCUCAUCAGCUCAUGUGCCCCUCCGCCUGGAUCACCAGACGACUCGCUGAGGAUCCGAGA3' 80 62.50% Kd: 3.1 nM 2003
Angiopoietin-2_Sullenger_2 Angiopoietin-2 (Ang2) 5'GAGGACGAUGCGGACUAGCCUCAUCAGCUCAUGUGCCCCUC3' 41 60.98% Kd: 2.2 nM 2003
Thrombin_Shao_1 Thrombin, Bovine 5'GCAAUGGUACGGUACUUCCUUUGGAAGAUAGCUGGAGAACUAACCAAAAGUGCACGCUACUUUGCUAA3' 68 44.12% Kd: 164 nM 2003
Thrombin_Shao_2 Thrombin, Bovine 5'GCAAUGGUACGGUACUUCCAAGUGCGGGGGGGAGGUGGUGGUUCCAAAAGUGCACGCUACUUUGCUAA3' 68 54.41% Kd: 240 nM 2003
HER3ECD_Landgraf_1 Oligomeric state of the extracellular domains of human epidermal growth factor receptor-3 (HER3ECD) 5'GGGAAUUCCGCGUGUGCCAGCGAAAGUUGCGUAUGGGUCACAUCGCAGGCACAUGUCAUCUGGGCGGUCCGUUCGGGAUCCUC3' 83 60.24% Kd: 45 nM in hrg-unbound; 400 nM in hrg-bound 2003
eIF4A_Nakamura_1 Mammalian translation initiation factor 4A (eIF4A) 5'GGGAGACAAGAAUAAAACGCUCAAACAUUGCAUCGACAGCUGCAAGGCUCCCGCCGUACAAACCUUCGACAGGAGGCUCACAACAGGC3' 88 53.41% Kd: 8 μM 2003
eIF4A_Nakamura_2 Mammalian translation initiation factor 4A (eIF4A) 5'GGGAGACAAGAAUAAAACGCUCAACAGGCGUUUAGCCUCUAAGUAACAGGGGCCUCCCAUGAGCUUCGACAGGAGGCUCACAACAGGC3' 88 53.41% Kd: 3 μM 2003
eIF4A_Nakamura_3 Mammalian translation initiation factor 4A (eIF4A) 5'GGGAGACAAGAAUAAAACGCUCAAGGGGACCGCGCCCCACAUGUGAGUGAGGCCGAAACGUAGAUUCGACAGGAGGCUCACAACAGGC3' 88 56.82% Kd: 44 nM 2003
eIF4A_Nakamura_4 Mammalian translation initiation factor 4A (eIF4A) 5'GGGAGACAAGAAUAAAACGCUCAAUGUGGAUGAUUUGUAUGAUCGCGCAUACAAUUCGACAGGAGGCUCACAACAGGC3' 78 46.15% Kd: 1 μM 2003
eIF4A_Nakamura_5 Mammalian translation initiation factor 4A (eIF4A) 5'GGGAGACAAGAAUAAAACGCUCAAGGGGACCGCGCCCCACAUGUGAGUGAGGCCGAAACAUAGAUUCGACAGGAGGCUCACAACAGGC3' 88 55.68% Kd: 27 nM 2003
ATP_Guo_1 ATP (Adenosine triphosphate) 5'UCAAUGGUACGGUACUUCCAUUGUCAUGUGUAUGUUGGGGAUUAAACCCUGAUUGAGUUCAGconCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGA3' 118 42.37% Kd: 1.3 ± 0.8 mM 2003
ATP_Guo_2 ATP (Adenosine triphosphate) 5'UCAAUGGUACGGUACUUCCAUUGUCAUGUGUAGGGUUGGGAAGAAACUGUGGCACUUCGGUGCCAGconCAACCCUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGA3' 122 46.72% Kd: 0.1 ± 0.06 mM 2003
MAb198 antibody_Lee_1 MAb198 antibody, Rat 5'GGGCCGGAGGUUAGCUUGCCCAUGGCAAGCAGGGCGCCACGGACCC3' 46 71.74% Kd: 30 nM 2003
4,4′-methylenedianiline_Labuda_1 4,4′-methylenedianiline (MDA) 5'GCCUGUUGUGAGCCUCCUGUCGAACUGCGAUCAGCGGUAAAUUUCCGCGCAGCCUCCACGCCGCUUGAGCGUUUAUUCUUGUCUCCC3' 87 57.47% Kd: 0.45 μM 2004
4,4′-methylenedianiline_Labuda_2 4,4′-methylenedianiline (MDA) 5'GCCUGUUGUGAGCCUCCUGUCGAACAGAGGCAGUACUCAUCAACCCGAGCCUUCCGUCCCUGAGUUGAGCGUUUAUUCUUGUCUCCC3' 87 55.17% Kd: 2 μM 2004
4,4′-methylenedianiline_Labuda_3 4,4′-methylenedianiline (MDA) 5'GCCUGUUGUGAGCCUCCUGUCGAAUGGGAGGAGUGCUGCUCUCCAGGCACUCUUGUUGCUCGGAUUGAGCGUUUAUUCUUGUCUCCC3' 87 55.17% Kd: 12 μM 2004
NFAT DBD_Lee_1 Nuclear factor of activated T cells DNA binding domain (NFAT DBD) 5'GGGAGAGCGGAAGCGUGCUGGGCCGAUAUGAAGGAGUGGAGAGGGUGGCAGCAUGGUCCGGAUCCAUAACCCAGAGGUCGAUGGAUCCCCCC3' 92 63.04% Kd: 11.1 nM 2004
NFAT DBD_Lee_2 Nuclear factor of activated T cells DNA binding domain (NFAT DBD) 5'GGGAGAGCGGAAGCGUGCUGGGCCGAGGGAGGCGAUAUGAAGGUGUAGAGAGGCCUCCUGGACACAUAACCCAGAGGUCGAUGGAUCCCCCC3' 92 63.04% Kd: 120 nM 2004
CRD of colicin E3_Yokoyama_1 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUACUGUCCUCCCUUCAGAGAGCGCGGGACCCUUAACUUGGGGCCCACGAACAGCUUCAGUUCCGUCUCGGCGUCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 121 56.20% Kd: 2±11 nM 2004
CRD of colicin E3_Yokoyama_2 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUUCCCUGGCCCAAGAUCCUAAUAAAGUUUUUUCGGACCGGAGCGAAACCACUAUCCUCUUAAGCAAUCUGUCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 119 47.06% Kd: 14±2 nM 2004
CRD of colicin E3_Yokoyama_3 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUGUACAACACAUCAUUACGGCUGCUAUUGGCUCCAAGCGUCUUUCUCCCUGGUCAAUAGUCCAGCCACCACGCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 120 50.83% Kd: 4±15 nM 2004
CRD of colicin E3_Yokoyama_4 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUGACAUCUGUAAGUAAGAUUCUAUCUGCAAAGCGGUUAGGAGGGCUCGGACUCUGAUUGCCUCCCCGCACCCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 119 51.26% Kd: 7±1 nM 2004
CRD of colicin E3_Yokoyama_5 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUGACAUCUGUAAGUAAGAUUCUAUCUGCAAAGCGGUUAGGGGGGCUCGGACUCUGAUUGCCUCCCCGCACCCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 119 52.10% Kd: 294±170 nM 2004
CRD of colicin E3_Yokoyama_6 C-terminal ribonuclease domain of colicin E3 (CRD of colicin E3) 5'GGGAGAAUUCCGACCAGAAGCUUGUCAGCUGCUCGCGGGAUCGAUCCAUUCGGUGGCCAUGCUCCGGAAGACGGGCCGGCUUCGCAAGACUCAGGCAUAUGUGCGUCUACAUGGAUCCUCA3‘ 121 58.68% Kd: 10±1 nM 2004
RANK_Nakamura_1 Receptor activator of NF-kappaB (RANK), Human 5'ACACAAUGGACGGAUUCGUAUGGGUGGGAUCGGGAAGGGCUACGAACACCGUAACGGCCGACAUGAGAG3' 69 56.52% Kd: 0.33 μM 2004
RANK_Nakamura_2 Receptor activator of NF-kappaB (RANK), Human 5'ACACAAUGGACGAUAUGGUAUUGAGGUGGGAAGGGGAUUGGGAUAAUUGCCAUAACGGCCGACAUGAGAG3' 70 48.57% Kd: 1.8 μM 2004
RANK_Nakamura_3 Receptor activator of NF-kappaB (RANK), Human 5'ACACAAUGGACGAUAGUGGUUGGGAUUGGGUGGGCGCACAAGUUGUUCCGUUAACGGCCGACAUGAGAG3' 69 53.62% Kd: 5.8 μM 2004
hTNFα_Zhang_1 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACCCCGGGUUCUGUAUGAUCCGACCGGUCAGAUAAGACCACAAGAAGACUCGCAAGA3' 71 53.52% NA 2004
hTNFα_Zhang_2 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGCAUCGUUUGCGUGGCGUGUCCGGGCGCCGAUUCGUAAAAAGAAGACUCGCAAGA3' 71 56.34% NA 2004
hTNFα_Zhang_3 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACUAGGCGGAUUGUUUCGAUUCUUUGCCUUGUCCCUAGUGCAAGAAGACUCGCAAGA3' 71 49.30% NA 2004
hTNFα_Zhang_4 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGUAUAUACGGAUUAGGUUGUAGCUCAGACCAGUAAUGUCAAGAAGACUCGCAAGA3' 71 45.07% NA 2004
hTNFα_Zhang_5 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGUGCUAGAUGCUACGAGUGGUCUCCUCACGUAGAAGGGGAAGAAGACUCGCAAGA3' 71 53.52% NA 2004
hTNFα_Zhang_6 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAGGUCCCACAUAGGUUGGUCUUGUUGUAUGGGCUGUUUGCAAAGAAGACUCGCAAGA3' 71 49.30% NA 2004
hTNFα_Zhang_7 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAGUGUUUUGGGAGAGAAAAGGGGGAGCCUUUACUUUGUUGGAAGAAGACUCGCAAGA3' 71 47.89% NA 2004
hTNFα_Zhang_8 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAGACGAUGUUAUCAGGGAGUUGGGAUCAUAUAGUCUUACAUAAGAAGACUCGCAAGA3' 71 43.66% NA 2004
hTNFα_Zhang_9 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGCAAGAGCCGCCCUAAUGGUUCAAUGGUAACUGUAUAUGAAGAAGACUCGCAAGA3' 71 47.89% NA 2004
hTNFα_Zhang_10 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAGACUUCUUGUGCCAUUAUGAAUUAUUGCUAAUCCUCUUGAAAGAAGACUCGCAAGA3' 71 40.85% NA 2004
hTNFα_Zhang_11 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAAGGACGUACUUGGAAAAGAGGCGCGAAGAACCUGGUAUGUAAGAAGACUCGCAAGA3' 71 49.30% NA 2004
hTNFα_Zhang_12 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAUAGGACGUACUUGGAAAAGAGGCGCGAAGAACCUGGUAUGAAGAAGACUCGCAAGA3' 71 49.30% NA 2004
hTNFα_Zhang_13 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAUGGCCACCUUGCCACUCUUCCUUGCAUAUUUUACUCCCGCAAGAAGACUCGCAAGA3' 71 50.70% NA 2004
hTNFα_Zhang_14 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACAAGCCGAGGGGGAGUAUCUGAUGACAAUUCGGAGCUCCAAAGAAGACUCGCAAGA3' 71 52.11% NA 2004
hTNFα_Zhang_15 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAUCAUGGUGUGUGAGUUAGCUCACGUGCCGUUUCGAAGGCGAAGAAGACUCGCAAGA3' 71 52.11% NA 2004
hTNFα_Zhang_16 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACAUGGGCUAGACCGGCAUAAAACUGCUGUAGUUGCACGCCAAGAAGACUCGCAAGA3' 71 52.11% NA 2004
hTNFα_Zhang_17 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGUUGUAGUAGUGGCUUGGGCAUAACUCAGUUAAACACUAAAGAAGACUCGCAAGA3' 71 45.07% NA 2004
hTNFα_Zhang_18 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUAGACCGCGGAAAAGGAAGGAAUUAGAUACAACGGAGAAGUGAAGAAGACUCGCAAGA3' 71 47.89% NA 2004
hTNFα_Zhang_19 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGCAUCGUUUGCGUGGCGUGUCCGGGCGCAAGAAGACUCGCAAGA3' 60 60.00% NA 2004
hTNFα_Zhang_20 Tumor necrosis factor alpha (hTNFα), Human 5'GGGAGGACGAUGUUACGUAUAUACGGAUUAGGUUGUAGCUCAGACCAAGAAGACUCGCAAGA3' 62 46.77% NA 2004
ARNO/cytohesin-2_Famulok_1 ADP-ribosylation factors (ARF) nucleotide-binding site opener (ARNO)/cytohesin-2 5'GGGAGAGACAAGCUUGGGUCGCGUUUUGCUAUUGAUUUCUUUUAACCUGGCCUGUUUGGGCCUCUUGCUCUUCCUAGGAGU3' 81 49.38% Kd: 115 ± 3 nM 2004
TCF-1_Jeong_1 T-Cell Factor-1 (TCF-1) protein 5'GGGGAGCUCGGUACCGGUGCGAUCCCCUGUUUACAUUGCAUGCUAGGACGACGCGCCCGAGCGGGUACCCAUUGUGUCGUCGGAAGCUUUGCAGAGGAUC3' 100 61.00% Kd: 100~500 nM 2004
RPKPQQFFGLM-NH2_Klussmann_1 RPKPQQFFGLM-NH2 (peptide, Substance P ) 5'GGAGCUUAGACAACAGCAGCGUGCAGGUGGGUAAAGGGGUGUGAUCGAGGGUCGAGAGGCACGCUCAGGUGAGUCGGUUCCAC'3 83 60.24% NA 2005
RPKPQQFFGLM-NH2_Klussmann_2 RPKPQQFFGLM-NH2 (peptide, Substance P ) 5'GGCGCAGGUGGGUAAAGGGGUGUGAUCGAGGGUCGAGAGGCGCC3' 44 68.18% Kd: 40 nM 2005
TFKBP*3R-2G_Verdine_1 TFKBP*3R-2G (cell surface protein) 5'GGGUUCGAAUGCAAGUCUGGUGAGUGUUGGGAGGGCAGUGACUUGCUUCGUAGUGUAAACUGACGUGGCGGUGUUACUUUACUGUUACGCUAGGUUACGGG3' 101 51.49% Kd: 4.3 ± 0.5 nM 2005
TFKBP*3R-2G_Verdine_2 TFKBP*3R-2G (cell surface protein) 5'CGAAUGCAAGUCUGGUGAGUGUUGGGAGGGCAGUGACUUGCUUCG3' 45 55.56% Kd: 2.8 ± 0.2 nM 2005
TFKBP*3R-2G_Verdine_3 TFKBP*3R-2G (cell surface protein) 5'GCAAGUCUGGUGAGUGUUGGGAGGGCAGUGACUUGC3' 36 58.33% Kd:16.1 ± 3.6 nM 2005
mCXCL10_Gearing_1 IFN-gamma-inducible (IFN-γ-Inducible) mCXCL10 Chemokine (also known as IP-10 in humans and CRG-2 in mice) 5'UAAUACGACUCACUAUAGGGAGGACGAUGCGGCAUGCGUCUGACCUACGUGCCAAGCAUUUGUGUAACCCGUCAGACGACUCGCCCGA3' 88 54.55% Kd: 3.5 nM, IC50 = 40.2 nM 2005
mCXCL10_Gearing_2 IFN-gamma-inducible (IFN-γ-Inducible) mCXCL10 Chemokine (also known as IP-10 in humans and CRG-2 in mice) 5'UCUGACCUACGUGCCAAGCAUUUGUGUAACCCGUCAGA3' 38 50.00% IC50 = 29.3 nM 2005
mCXCL10_Gearing_3 IFN-gamma-inducible (IFN-γ-Inducible) mCXCL10 Chemokine (also known as IP-10 in humans and CRG-2 in mice) 5'UAAUACGACUCACUAUAGGGAGGACGAUGCGGAGUUUCUUCUGAGGUCUGAACCUUUCGAAAGCUGGCGCUCAGACGACUCGCCCGA3' 87 52.87% Kd: 1.53 nM 2005
mCXCL10_Gearing_4 IFN-gamma-inducible (IFN-γ-Inducible) mCXCL10 Chemokine (also known as IP-10 in humans and CRG-2 in mice) 5'UAAUACGACUCACUAUAGGGAGGACGAUGCGGACUGAACCUAAUUUGAAAUUGGCUGGCGCGCAUAUUCCGUCAGACGACUCGCCCGA3' 88 51.14% Kd: 1.76 nM 2005
HSV-1 US11_Coen_1 Herpes simplex virus-1 (HSV-1) US11 5'GGGAAUGGAUCCACAUCUACGAAUUCGCAAUCCUGUAUUGAACUUCUCACUAAAACUUCACUGCAGACUUGACGAAGCUU3' 80 42.50% Kd: 70 nM 2005
CsrA_Babitzke_1 Carbon storage regulation protein A, Escherichia coli (CsrA of E. coli) 5'ACCGAGUCCAGAAGCUUGUAGUACACAAGGAUGUGCCAUGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC3' 81 45.68% Kd: 7.1 ± 0.8 nM 2005
eIF4E_Nakamura_1 Mammalian eukaryotic translation initiation factor 4F (eIF4E) 5'GGGAGACAAGAAUAAACGCUCAAUGUUCAACCAGAGUGAAACCACUAACGGGUCAGAGCCCCUUCGACAGGAGGCUCACAACAGGC3' 86 52.33% Kd: 11.2 nM 2005
eIF4E_Nakamura_2 Mammalian eukaryotic translation initiation factor 4F (eIF4E) 5'GGGAGACAAGAAUAAACGCUCAAGCCAGAGCAACAACCUUCCGAGCCGCGGGAUAAAACCGAGUUCGACAGGAGGCUCACAACAGGC3' 87 55.17% NA 2005
pre-PilS_Wu_1 Type IVB pili of Salmonella enterica (S. enterica) serovar Typhi (pre-PilS) 5'GCGGAAUUCUAAUACGACUCACUAUAGGGAACAGUCCGAGCCUCACUGUUAUCCGAUAGCAGCGCGGGAUGAGGGUCAAUGCGUCAUA3' 88 51.14% Kd: 8.56 nM 2005
HA influenza virus_Kumar_1 Hemagglutinin influenza virus (HA influenza virus) 5'GGGAGAAUUCCGACCAGAAGGGUUAGCAGUCGGCAUGCGGUACAGACAGACCUUUCCUCUCUCCUUCCUCUUCU3' 74 54.05% Kd: 188 ± 36 pM 2005
HA influenza virus_Kumar_2 Hemagglutinin influenza virus (HA influenza virus) 5'GGGAGAAUUCCGACCAGAAGGGUUAGCGGUCGUCUUAAGUAGUUUUUGGUCCUUUCCUCUCUCCUUCCUCUUCU3' 74 48.65% Kd: 115 ± 23 pM 2005
3Dpol_Stonehouse_1 RNA-dependent RNA polymerase (3Dpol) 5'GGGAAGGGAUCCACAUCUACAAAUUCCUUCAUAAUAAACCCGUCCACGCCCUUCGAAGCAGUUCAGACGUCACUU3' 75 48.00% Kd: 460 nM 2006
3Dpol_Stonehouse_2 RNA-dependent RNA polymerase (3Dpol) 5'GGGAAGGGAUCCAAUCUACAAAUUCGUUAACAGAAAACCUCAGUUGCUGGGUUGUUUUCACUGCAAACUUGACAAAGCUA3' 80 41.25% Kd: 375 ± 46 nM 2006
3Dpol_Stonehouse_3 RNA-dependent RNA polymerase (3Dpol) 5'GGGAAUGGAUCCACAUCUACGAAUUCCUUACCCGUGAACCGCAGUUGCUGAGUUGUUCGAAGCAGUUCAGACGUCACUU3' 79 49.37% Kd: 625 nM 2006
3Dpol_Stonehouse_4 RNA-dependent RNA polymerase (3Dpol) 5'GGGUUAACAGAAAACCUCAGUUGCUGGGUUGU3' 32 46.88% Kd: 325 2006
polβ_Miller_1 DNA polymerase beta (polβ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGGUUGGGUUGUCGUAGAUAGAGCGCUUCAAUUCACUGCAGACUUGACGAAGCUU3' 80 47.50% Kd: 290 ± 80 nM 2006
polκ_Miller_2 DNA polymerase kappa (polκ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGGUUGGGUUGUCGUAGAUAGAGCGCUUCAAUUCACUGCAGACUUGACGAAGCUU3' 80 47.50% Kd: 410 ± 50 nM 2006
polβ_Miller_3 DNA polymerase beta (polβ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGGUUGGGUUGUCGUAGAUAUAGCUUAGCCAUUCACUGCAGACUUGACGAAGCUU3' 80 46.25% Kd: 430 ± 130 nM 2006
polκ_Miller_4 DNA polymerase kappa (polκ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGGUUGGGUUGUCGUAGAUAUAGCUUAGCCAUUCACUGCAGACUUGACGAAGCUU3' 80 46.25% Kd: 500 ± 100 nM 2006
polβ_Miller_5 DNA polymerase beta (polβ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGGGUGGGUUGUCGUGGAUGACGAUUAUCAGUUCACUGCAGACUUGACGAAGCUU3' 80 48.75% NA 2006
polβ_Miller_6 DNA polymerase beta (polβ) 5'GGGAAUGGAUCCACAUCUACGAAUUUCGGGGGGGUUGUUCGUGGAAAAUGCUUGCGUUCACUGCAGACUUGACGAAGCUU3' 80 50.00% Kd: 490 ± 70 nM 2006
polκ_Miller_7 DNA polymerase kappa (polκ) 5'GGGAAUGGAUCCACAUCUACGAAUUUCGGGGGGGUUGUUCGUGGAAAAUGCUUGCGUUCACUGCAGACUUGACGAAGCUU3' 80 50.00% Kd: 750 ± 160 nM 2006
polβ_Miller_8 DNA polymerase beta (polβ) 5'GGGAAUGGAUCCACAUCUACGAAUUCGUUAACUGACCCAGGGAAGUGCCACCCCCCUUCACUGCAGACUUGACGAAGCUU3' 80 52.50% NA 2006
ovine Prion protein_Marc_1 RecombiNAt ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles 5'GAGGAUCCGCCGAGUAACAGACGUCGGGGAUUGGCAAACCCCGUUUCCUUGAGCGACCCCCUUGAGGCUCGAAUUCGCCC3' 80 61.25% Kd: 28.9 ± 0.8 nM (VRQ), Kd: 14.6 ± 1.3 nM (ARR) 2006
ovine Prion protein_Marc_2 RecombiNAt ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles 5'GAGGAUCCGCCGAGUAACAGACGUCGGGGAUUGGCAAACCCCGUUUCCUUGAG3' 53 58.49% NA 2006
ovine Prion protein_Marc_3 RecombiNAt ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles 5'GGCAAACCCCGUUUCCUUGAGCGACCCCCUUGAGGCUCGAAUUCGCCC3' 48 62.50% NA 2006
ovine Prion protein_Marc_4 RecombiNAt ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles 5'GAGGAUCCGCCGAGUAACAGAGUAGCAACAGAAUUGGAUCCCGACCACUAAGAACCCGGCCUUGAGGCUCGAAUUCGCCC3' 80 56.25% Kd: 72.6 ± 3.7 nM (VRQ), Kd: 23.2 ± 0.5 nM (ARR) 2006
ovine Prion protein_Marc_5 RecombiNAt ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) 5'GAGGAUCCGCCGAGUAACAGUGCCAUGAGUGAAAUAAAACCAUCCGGAACUAAGACUGCGCUUGAGGCUCGAAUUCGCCC3' 80 52.50% Kd: 55.3 ± 1.4 nM (VRQ) 2006
ovine Prion protein_Marc_6 RecombiNAt ovine PrP (prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles 5'GAGGAUCCGCCGAGUAACAGCGUGCAGGUACUAGCUCCACCCCGAGGGGGCACAUCAUUUCUUGAGGCUCGAAUUCGCCC3' 80 60.00% Kd: 20 nM 2006
CED-9_Xue_1 Caenorhabditis elegans Bcl-2 homolog CED-9 5'AGGGAGGACGAUGCGGGGUGCUUCGAGCGUAGGAAGAAAGCCGGGGGCUGCAGAUAAUGUAUAGCCAGACGACGGA3' 76 59.21% Kd: ~4nM 2006
CED-9_Xue_2 Caenorhabditis elegans Bcl-2 homolog CED-9 5'AGGGAGGACGAUGCGGGAUGGACGCUUAUCCGCAUAGAGGUUUACUACUUCGGAGACUGCCGAUACAGACGACGGA3' 76 55.26% Kd: ~16 nM 2006
Bovine factor IX_Mizuno_1 Bovine factor IX 5'GGGAGCUCAGCCUUCACUGC-CUACGCGGGCGUUUACGUAACGGCUUAUGGGGAGCUGAGCGCUUGACCGUGGUAGUGCUAAGCAGUAAACGAG-GGCACCACGGUCGGAUCCAC3' 113 60.18% Kd: 10 nM 2006
Hemagglutinin_Kumar_1 Influenza B virus hemagglutinin (HA) (B/Johannesburg/05/1999), Human 5'GGGAGCUCAGCCUUCACUGCACUCCGGCUGGUGGACGCGGUACGAGCAAUUUGUACCGGAUGGAUGUUCGGGCAGCGGUGUGGCAGGGAUGAGCGGCACCACGGUCGGAUCCAC3' 114 64.04% Kd: 44 ± 6 nM 2006
B1-CT_Famulok_1 Cytoplasmic tail of BACE (B1-CT) 5'GGGAUAGGAUCCACAUCUACGUAUUACGCAACGCCGGGCCACUACGCGAAUGGCAAGCCCGUCGACUUCACUGCAGACUUGACGAAGCUU3' 90 55.56% Kd: 280 nM 2006
B1-CT_Famulok_2 Cytoplasmic tail of BACE (B1-CT) 5'GGGAUAGGAUCCACAUCUACGUAUUAGUACACGUCGGCCACCUACGCGAAGUGGAAGCCUCAUUUGUUCACUGCAGACUUGACGAAGCUU3' 90 50.00% Kd: 360 nM 2006
Haemagglutinin_Kumar_1 Haemagglutinin (HA) region of the target strain A/Panama/2007/1999(H3N2) 5'GGGAGAAUUCCGACCAGAAGGGUUAAGCAGUCGGCAUGCGGUACAGACAGACCUUUCCUCUCUCCUUCCUCUUCU3' 75 53.33% Kd: 188 pM 2006
rTGF_Nakamura_1 RecombiNAt transforming growth factor-beta type III receptor displayed on cell surface 5'GGGCCAGGCAGCGAGAGAUAAGCAGAAGAAGUAUGUGACCAUGCUCCAGAGAGCAACUUCACAUGCGUAGCCAAACCGACCACACGCGUCCGAGA3' 95 55.79% Kd: 2.47 nM 2006
Coedine_Smolke_1 Coedine 5'GGGACAGGGCUAGCAGUAGGAUUGGGUGAGGGGAUGUGCUGUGGAGGCAAAGCUUCCG3' 58 60.34% Kd: 4.00 ± 0.13 μM 2006
Coedine_Smolke_2 Coedine 5'GGGACAGGGCUAGCUUAGUGCUAUGUGAGAAAAGGGUGUGGGGGGAGGCAAAGCUUCCG3' 59 57.63% Kd: 2.50 ± 0.06 μM 2006
S37A-β-catenin_Jeong_1 S37A-β-catenin, Human 5'GGACGCGUGGUACCAGGCCGAUCUAUGGACGCUAUAGGCACACCGGAUACUUUAACGAUUGGCUAAGCUUCCGCGGGGAUC3' 81 56.79% Kd: ~5.0 nM 2006
AMPA receptor_Jayaraman_1 Alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) (α-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) receptors 5'ACCGAGUCCAGAAGCUUGUAGUACUCGGCGAACUACCUAACCCCCCACAAUUGUAUUAUCGCCCGCCUAGAUGGCAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC3' 107 48.60% Kd: 37 ± 5 nM 2007
Thyroxine_Perreault_1 Thyroxine (T4) 5'GAAUUCGUCGACGGAUCCGCAGUGCGUCUUGGGUUGUGAGCUCCCGGCUCGCAUUGUGAGGUGGAGGGGGACGUGCUGCAGGUCGACGCAUGCGCCG3' 97 64.95% Kd: 50±10 μM 2007
Calsenilin_Yu_1 Biased conformation(s) of calsenilin 5'GGGACGCGUGGUACCGACGGAGGCUUGUUUAUGUAGGGAUGUAAGGGGAUGGGCAAUGUGGCGACAGCUUCCGCGGGGAUC3' 81 60.49% Kd: 43 nM for Ca2+ bound, 79 nM for Ca2+ unbound 2007
Calsenilin_Yu_2 Biased conformation(s) of calsenilin 5'GGGACGCGUGGUACCAAAGAGGCUGCGCGGAAGUGAGGGUGUUGGUUACGAAGGUUGGUGUGUGAAGCUUCCGCGGGGAUC3' 81 60.49% Kd: 190 nM for Ca2+ bound 2007
RF-1_Aoyama_1 Release factor 1, Escherichia coli (E. Coli) 5'GGACCGAGAAGYYACCCAGGAUUGCGUGUUAAGGCGCUCGGCUCGAUAUUUAUGCUGGUCAUGGUGGACGCACAUCGCAGCAAC3' 82 56.10% Kd: 30 ± 6 nM 2007
beta(2)m fibrils_Stockley_1 Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) 5'GGGCCAAGCUUGCAUGCCUGCAGUUGGUUACGCGUACAGUGAAACUCGGAAAGUUGAAGGGCCAAAUGGGAACGGUACCGAGCUCAGGUUCCC3' 93 55.91% Kd: 1.15E-08 M 2007
beta(2)m fibrils_Stockley_2 Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) 5'GGGCCAAGCUUGCAUGCCUGCAGAAAAAUAAAGUGUGUACACUAAAUUGCUAGCCCCCGGAAAGAAGGUCAACAAAAGUCAGUGGUACCGAGCUCAGGUUCCC3' 103 49.51% Kd: 7.48E-09 M 2007
beta(2)m fibrils_Stockley_3 Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) 5'GGGCCAAGCUUGCAUGCCUGCAGGCAAACGGGGGCGUUUCGGCGGAGGAGUGGGAAGAAAAACGAGAGAAGAGUUGGAACGGGUACCGAGCUCAGGUUCCC3' 101 60.40% Kd: 2.21E-08 M 2007
GluR2 glutamate receptor_Niu_1 RecombiNAt GluR2Qflip AMPA receptor transiently expressed in HEK-293 (human embryonic kidney) cells 5'GGGCGAAUUCAACUGCCAUCUAGGCAGUAACCAGGAGUUAGUAGGACAAGUUUCGUCC3' 58 50.00% Kd: 0.419 ± 0.221 nM & IC50: 121 ± 7 nM 2007
GRK2_Blind_1 G-protein-coupled receptor kinase 2 (GRK2) 5'CUGCAGUUCGGGUAGCACAGACCAUACGGGAGAGAAACUUGUGCAACCCGGGGCUAC3' 57 57.89% Kd: 78.2 nM ± 2.6 nM 2008
GRK2_Blind_2 G-protein-coupled receptor kinase 2 (GRK2) 5'GGUUCGGGUAGCACAGACCAUACGGGAGAGAAACUUGUGCAACCCGGGGCU3' 51 58.82% Kd: 101.2 nM ± 7.2 nM 2008
Mbl_Berglund_1 Drosophila muscleblind protein (Mbl) 5'GGGAAUGGAUCCACAUCUACGAAUUCACCGUAGAUGAUGGAUGUGCGGUAGAGUCUUUCACUGCAGACUUGACGAAGCUU3' 80 47.50% Kd: 0.23 nM ± 0.09 2008
bPrP_Nishikawa_1 Bovine Prion Protein (bPrP) 5'GGGAGGUGGAACUGAAGGAGACAAUCCAUUCAUCUCUCGAAUGAGGAAGUAGCCCAAGAGGAGGAGGAGGAUGAGCACUUCGCAAUCGCUCUACGCA3' 97 52.58% Kd: 82 ± 21 nM 2008
TfR-ECD_Neufeld_1 Mouse transferrin receptor (TfR-ECD) 5'GGGCGAAUUCCGCGUGUGCUGAGGGCGGAAGAACUAAUUUGGGACGGAUUGCGGCCGUUGUCUGUGGCGUCCGUUCGGG3' 79 62.03% NA 2008
TfR-ECD_Neufeld_2 Mouse transferrin receptor (TfR-ECD) 5'GGACGGAUUGCGGCCGUUGUCUGUGGCGUCCGUUCG3' 36 66.67% NA 2008
Abeta_Mihara_1 Amyloid beta-peptide (Aβ) 5'GGGAUGUUCUAGGCGGUUGAUGAUAGCGUAUGCCACUCUCCUGGGACCCCCCGCCGGAUGGCCACAUCCAGAGUAGCAUAAUUGAUCCGA3' 90 56.67% Kd: 21.6 μM 2009
Abeta_Mihara_2 Amyloid beta-peptide (Aβ) 5'GGGAUGUUCUAGGCGGUUGAUGAUUUGGGGUGUCGGGCGAUUUUUAGGGUUGGGCCAGGCCGUCAUCCAGAGUAGCAUAAUUGAUCCGA3' 89 52.81% Kd: 10.9 μM 2009
PAI-1_Fortenberry_1 Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1) 5'GGGAGGACGAUGCGGAUCAACUCACCGUAGGUCUAGUGAGAACUUCAAGUCUACUCAGACGACUCGCUGAGGAUCC3' 76 53.95% Kd: 177 pM 2009
PAI-1_Fortenberry_2 Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1) 5'GGGAGGACGAUGCGGAGCGACUGACGAUCUUGAGUAAACCGCUCAUCCACGUAGUCAGACGACUCGCUGAGGAUCC3' 76 57.89% Kd: 920 pM 2009
SARS-CoV N protein_Oh_1 SARS-CoV nucleocapsid (N) protein 5'GGGAGAGCGGAAGCGUGCUGGGCCUGUCGUUCGCUGUCUUGCUACGUUACGUUACACGGUUGGCAUAACCCAGAGGUCGAUGG3' 83 59.04% Kd: 1.65 ± 0.41 nM 2009
EGFR_Ellington_1 Epithelial Growth Factor Receptor (EGFR) 5'GGCGCUCCGACCUUAGUCUCUGCAAGAUAAACCGUGCUAUUGACCACCCUCAACACACUUAUUUAAUGUAUUGAACGGACCUACGAACCGUGUAGCACAGCAGA3' 104 48.08% kd: 7 nM 2009
ASR_Rao_1 Sulforhodamine analogue (ASR) fluorogen 5'GAAGCUUGGGAAUUCGAGCUCCUGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGAUUCGAAGACGUCCAGCUGAUCUAGAUUCUAUAGUGUCACCUAAAU3' 133 53.38% Kd: 39.1 ± 7.6 μM or 3.5 ± 1.5 μM 2010
ASR_Rao_2 Sulforhodamine analogue (ASR) fluorogen 5'GGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGACUCGAAGACGUCCAGCUGAUCC3' 88 62.50% Kd: 26.9 ± 2.2 μM 2010
PTP1B_Tremblay_1 Protein tyrosine phosphatase 1B (PTP1B) 5'GGGAAUGGAUCCACAUCUACUGUGAUCAAUUUGGCAAUCCGCCACACGAGACUGCAGACUUGACGAAGCUU3' 71 49.30% Ki: 200 pM 2010
PTP1B_Tremblay_2 Protein tyrosine phosphatase 1B (PTP1B) 5'm(GA)AUUCUGUGAUCAAUUUGGCAAUCCGCCACACGAGUm(UsC)3' 39 46.15% Ki: 166 nM and 168 nM 2010
PTP1B_Tremblay_3 Protein tyrosine phosphatase 1B (PTP1B) 5'GGGAAUGGAUCCACAUCUACUGUGAUUAAUUUGGCAAUCCGCCACACUAGACUGCAGACUUGACGAAGCUU3' 71 46.48% Ki: 250 nM 2010
SPC_Waga_1 Sphingosylphosphorylcholine (SPC) 5'GGGAAUGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCACUGCAGACUUGACGAAGCUU3' 79 44.30% Kd: 20.9 ± 0.19 nM 2010
SPC_Waga_2 Sphingosylphosphorylcholine (SPC) 5'GGGAAUGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCACUGCAGACUUGACGAAGCUU3' 80 47.50% Kd: 33.2 ± 0.19 nM 2010
SPC_Waga_3 Sphingosylphosphorylcholine (SPC) 5'GGAAUGGAUCCACAUCUACGAAUUCGCAUUGUCCGCACGCAAAGCAUUAUUGUGAUUCACUGCAGACUUGACGAAGCUU3' 79 45.57% Kd: 90.4 ± 2.35 nM 2010
SPC_Waga_4 Sphingosylphosphorylcholine (SPC) 5'GGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCC3' 54 44.44% Kd: 186 ± 5.05 nM 2010
SPC_Waga_5 Sphingosylphosphorylcholine (SPC) 5'GGAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUCC3' 41 46.34% Kd: 252 ± 7.04 nM 2010
SPC_Waga_6 Sphingosylphosphorylcholine (SPC) 5'GGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCC3' 55 49.09% Kd: 221 ± 4.84 nM 2010
SPC_Waga_7 Sphingosylphosphorylcholine (SPC) 5'GGCGAAUUCUUCCGUUAUUGGAGCCAAGUCGCC3' 33 54.55% Kd: 196 ± 2.98 nM 2010
ZAP_Gao_1 Zinc-finger antiviral protein (ZAP) 5'GGGAACAGUCCGAGCCUGCGUGCGAGGAGGUGGAGAGGGUGGGUGUGCGUGGCGUGGGGUGAAUUCGUCAUA3' 72 63.89% NA 2010
ZAP_Gao_2 Zinc-finger antiviral protein (ZAP) 5'GGGAACAGUCCGAGCCAAGCGGUAGCGUCAGGGGGUGGAGGGAGGAGGCCGCGUGGUGUGGGUGAAUUCGUCAUA3' 75 64.00% NA 2010
IL-17A_Nakamura_1 Interleukin-17A (IL‐17A) 5'UAAUACGACUCACUAUAGGGAGCAGGAGAGAGGUCAGAUGGGUCUAGCCGGAGGAGUCAGUAAUCGGUAGACCCAUCUGACCUCUCUCCUGCUCCC3' 96 54.17% Kd: 48.5 pM 2011
E.coli_O157:H7_Lee_1 Escherichia coli (E. coli) O157:H7 5'GGGAUACCAGCUUAUUCAAUUUGAUUCCAUCUUCCUGGACUGUCGAAAAUUCAGUAUCGGGAGGUUACGUAUUUGGUUUAUAGAUAGUAAGUGCAAUCU3' 99 38.38% Kd: 110 nM 2011
HPV-16 E7_Salas_1 Human papillomavirus type 16 (HPV-16) E7 oncoprotein 5'UAAUACGACUCACUAUAGGGAGACCCAAGCCGAUUUAUUUUGUGCAGCUUUUGUUCCCUUUAGUGAGGGUUAAUU3' 75 40.00% Kd: 1.9 µM 2011
HBV P protein_Hu_1 RecombiNAt truncated human hepatitis B virus (HBV) P protein (miniP) 5'UGUUCAUGUCCUACUGUUCAAACAAAAAAACUGUGCACAAAAAUAAAUUGGGGCAUGGACA3' 61 36.07% NA 2011
HBV P protein_Hu_2 RecombiNAt truncated human hepatitis B virus (HBV) P protein (miniP) 5'UGUUCAUGUCCUACUGUUCACAGAAAAUAGCUGUGCAAAAAAAAAAGAUGGGGCAUGGACA3' 61 39.34% NA 2011
Ser-Tyr-Gly(in GFP)_Jaffrey_1 The fluorophore in Green fluorescent protein (GFP) (Ser65-Tyr66-Gly67) 5'GACGCAACUGAAUGAAAUGGUGAAGGACGGGUCCAGGUGUGGCUGCUUCGGCAGUGCAGCUUGUUGAGUAGAGUGUGAGCUCCGUAACUAGUCGCGUC3' 98 55.10% KD: 537 nM 2011
Ser-Tyr-Gly(in GFP)_Jaffrey_2 The fluorophore in Green fluorescent protein (GFP) (Ser65-Tyr66-Gly67) 5'UCUAGAAUUCAAUUUGCGUAUUGAGACAGGGCCGCGCUAUUUCUGGAGGGGCGGUACAUGAAAGUGGUGGUUGGGUGCGGUCGGAGAUAGCUCGAGCAAUGC3' 102 52.94% KD: 464 nM 2011
Ser-Tyr-Gly(in GFP)_Jaffrey_3 The fluorophore in Green fluorescent protein (GFP) (Ser65-Tyr66-Gly67) 5'GGGAGAUACGCUCUAGAAUUCAAUUGCAUGGUGGUCUGGGACAGACGUGUGGACGGCACACAGCGUGAGGCUUUGGUGGGUUAUGGCUGUCAUGCGAGAUAGCUCGAGCAAUGC3' 114 54.39% KD: 406 nM 2011
OX40_Nair_1 OX40, T cell costimulatory receptor 5'UCGGGCGAGUCGUCUGGGGAGGACGAUGCGGAAAAAAGAACACUUCCGAUUAGGGCCCACCCUAACGGCCGCAGGGGAGGACGAUGCGGCCGCAUCGUCCUCCCUA3' 106 63.21% Kd: 1.7 nM 2012
OX40_Nair_2 OX40, T cell costimulatory receptor 5'UCGGGCGAGUCGUCUGGGGAGGACGAUGCGGAACGGGACCACCCAUGCCAGGGGACCACCUCAGGCAGCGCCAGACGACGGGAGGACGAUGCGGCCGCAUCGUCCUCCCUA3' 111 69.37% Kd: 10 nM 2012
HIRRV-Aoki_1 Hirame rhabdovirus (HIRRV) 5'GGUGUAUAGGUAUUGAAUCAAUUGUUUUAGCGUUGUCUUA3' 40 32.50% NA 2012
HIRRV-Aoki_2 Hirame rhabdovirus (HIRRV) 5'GGAACGCGAGCUUAGAUUUCGGAGAACAGUUUGUAAUUGUU3' 41 41.46% NA 2012
HIRRV-Aoki_3 Hirame rhabdovirus (HIRRV) 5'GUCCUAUACAGUGUGACCGGUUGAAAGUGGGUUCGUUG3' 38 50.00% NA 2012
HIRRV-Aoki_4 Hirame rhabdovirus (HIRRV) 5'GGGUUAAGCCGGAUUGUAGACUGUAACAGGUAGAGCUGGC3' 40 52.50% NA 2012
CypB_White_1 Cyclophilin B (CypB) 5'GGGAGGACGAUGCGGGGACCUAUGCAGUAGCCAGUGUGGACUGGGCUGCCCCCCCCAGACGACUCGCCCGA3' 71 69.01% Kd: 1.5 ± 0.02 nM 2012
hMMP-9_Toulmé_1 human matrix metalloprotease 9 (hMMP-9) GGUUACCAGCCUUCACUGCCCUGCCCUCACCCGUUAGCCUGAGCGCCCCGCACCACGGUCGGUCACAC 68 NA% 8.1 ± 3.4 nM 2012
hMMP-9_Toulmé_2 human matrix metalloprotease 9 (hMMP-10) GGUUACCAGCCUUCACUGCUCCCGGACGCGUCUGUAUCCGCUACCCGCCGCACCACGGUCGGUCACAC 68 NA% 15.4 ± 2.8 nM 2012
hMMP-9_Toulmé_3 human matrix metalloprotease 9 (hMMP-11) GGUUACCAGCCUUCACUGCCCUGCGCCAACCCGUUAGCCUUGUCGCCCCGCACCACGGUCGGUCACAC 68 NA% 18.3 ± 3.7 nM 2012
hMMP-9_Toulmé_4 human matrix metalloprotease 9 (hMMP-12) UGCCCUGCCCUCACCCGUUAGCCUGAGCGCCCCGCA 36 NA% Kd: 20 nM 2012
hMMP-9_Toulmé_5 human matrix metalloprotease 9 (hMMP-13) UGCCCUGCCCUCACCCGUUAGCCUGAGCGCCCCGCA 36 NA% NA 2012
HER2 expressing cell_Dassie_1 MDA-231/LUC and MDA-MB-231 cell lines GGGAGGACGAUGCGUCCUUGUCGUCUUGCGUCCCCAGACGACUCGCCCGA 50 NA% 200 nM 2012
CD133_Duan_1 CD133-positive on cell line HT-29 5'CCCUCCUACAUAGGG'3 15 60.00% Kd: 83.2 ± 82.9 nM 2013
CD133_Duan_2 CD133-positive on cell line Hep3B 5'CCCUCCUACAUAGGG'3 15 60.00% Kd: 33.9 ± 12.5 nM 2013
CD133_Duan_3 CD133-positive on cell line HT-29 5'CAGAACGUAUACUAUUCUG3' 19 36.84% Kd: 145.1 ± 75.4 2013
CD133_Duan_4 CD133-positive on cell line Hep3B 5'CAGAACGUAUACUAUUCUG3' 19 36.84% Kd: 52.3 ± 15.8 nM 2013
CD44_Ismail_1 Cell-surface Glycoprotein CD44 5'GGGAUGGAUCCAAGCUUACUGGCAUCUGGAUUUGCGCGUGCCAGAAUAAAGAGUAUAACGUGUGAAUGGGAAGCUUCGAUAGGAAUUCGG3' 90 47.78% Kd: 81.3 ± 30.6 nM 2013
ERα_Shi_1 Estrogen receptor alpha (ERα) 5'GGGCAGAGGCACCGCGAACAAAACGCAAGACAGAGUGCCGACAAGAGCACUACAAGCUUCUGCCC3 65 58.46% Kd:16 nM 2014
ERα_Shi_2 Estrogen receptor alpha (ERα) 5'GGGAGAAUUCAACUGCCAUCUAGGCACACGCGAGAUAGAGCGAGGCCUCCAAAAAUGGCCACGCCAGGAAGCAGUACUACAAGCUUCUGGACUCGGU3' 97 54.64% Kd: 21 nM 2014
ERα_Shi_3 Estrogen receptor alpha (ERα) 5'GGGAGAAUUCAACUGCCAUCUAGGCGACCCAGGGCCGGGACGCAAAGCAGCCAAAACAGACGGCCCCAGUCAGGGAGUUACUACAAGCUUCUGGACUCGGU3' 101 58.42% Kd: 30 nM 2014
HA_Kumar_1 Hemagglutinin (HA) of highly pathogenic avian influenza (HPAI H5N1) 5'UCUAAUACGACUCACUAUAGGAGCUCAGCCUUCACUGCCUGUUAGAGUUUCCUAAAAGCGAACUGGCGCCCUCGUCAGCAUCUGGCAGACGAGUGGAGACGGACUAACCACAGGCACCACGGUCGGAUCCUG3' 132 54.55% NA 2014
HA_Kumar_2 Hemagglutinin (HA) of highly pathogenic avian influenza (HPAI H5N1) 5'UCUAAUACGACUCACUAUAGGAGCUCAGCCUUCACUGCGAGAUUGUUCUGACCGAGUUGCCUAGCAGGGCAACCGCUGGAACUUGAAGUCGGUAAUGCGAGCGGAAAGCCUUGGCACCACGGUCGGAUCCUG3' 132 54.55% Kd: 170 pM 2014
HA_Kumar_3 Hemagglutinin (HA) of highly pathogenic avian influenza (HPAI H5N1) 5'UCUAAUACGACUCACUAUAGGAGCUCAGCCUUCACUGCGGUGACCGGAGGAAUACGCGGACGGAGAAAGGGUUGGCCUCGUGGAUGGCGGAUACCCGUCCAGGGAUCUUCUAGGCACCACGGUCGGAUCCUG3' 132 58.33% NA 2014
GP2_Ohno_1 Glygoprotein 2 (GP2), Mouse 5'GGGAGAAUUCCGACCAGAAGCAAGUAGUUGGCGCCUACUAUAGAAAUACGCCUUUCCUCUCUCCUUCCUCUUCU3' 74 48.65% Kd: 110 ± 2.6 nM 2014
gHA1_Kim_1 Glycosylated receptor-binding domain of the HA protein (gHA1) 5'GGGUUCACUGCAGACUUGACGAAGCUUGCUUGACGGAGAUCAAGGGCGAGUCGCAUACCAAGUUGAUGGGGAAUGGAUCCACAUCUACGAAUUC3' 94 51.06% NA 2014
DFHBI_Jaffrey_1 RNA Mimic of Green Fluorescent Protein (Fluorophores, coupled with fluorescence-activated cell sorting (FACS); Escherichia coli 5'GAGACGCAACUGAAUGAAAUGGUGAAGGAGACGGUCGGGUCCAGGCACAAAAAUGUUGCCUGUUGAGUAGAGUGUGGGCUCCGUAACUAGUCGCGUCAC3' 99 52.53% NA 2014
DFHBI_Jaffrey_2 RNA Mimic of Green Fluorescent Protein (Fluorophores, coupled with fluorescence-activated cell sorting (FACS); Escherichia coli 5'GAGACGGUCGGGUCCAGAUAUUCGUAUCUGUCGAGUAGAGUGUGGGCUC3' 49 55.10% KD: 360 nM 2014
DFHBI_Jaffrey_3 RNA Mimic of Green Fluorescent Protein (Fluorophores, coupled with fluorescence-activated cell sorting (FACS); Escherichia coli 5'GCCCGGAUAGCUCAGUCGGUAGAGCAGCGGAGACGGUCGGGUCCAGAUAUUCGUAUCUGUCGAGUAGAGUGUGGGCUCCGCGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA3' 114 62.28% NA 2014
DFHBI_Jaffrey_4 RNA Mimic of Green Fluorescent Protein (Fluorophores, coupled with fluorescence-activated cell sorting (FACS); Escherichia coli 5'GCCCGGAUAGCUCAGUCGGUAGAGCAGCGGAGACGGUCGGGUACGCACAGGGCAAACCAUUCGAAAGAGUGGGACGCAAAGCCUCCGGCCUAAACCAGAAGACAUGGUAGGUAGCGGGGUUACCGAUAGUAGAGUGUGGGCUCCGCGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA3' 179 60.89% NA 2014
DFHBI_Jaffrey_5 RNA Mimic of Green Fluorescent Protein (Fluorophores, coupled with fluorescence-activated cell sorting (FACS); Escherichia coli 5'GCCCGGAUAGCUCAGUCGGUAGAGCAGCGGAGACGGUCGGGUCCAUCUGAGACGGUCGGGUCCAGAUAUUCGUAUCUGUCGAGUAGAGUGUGGGCUCAGAUGUCGAGUAGAGUGUGGGCUCCGCGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA3' 157 61.15% NA 2014
HER2 overexpressing cell line_Abnous_1 RHER2/neu protein via TUBO cell line 5'ACCGAGUCCAGAAGCUUGUAGUACUGCUGGAGCAUUUAUGGAUGAACCUUGGACGGAAGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC3' 100 46.00% Kd: 133.9 ± 12.78 nM 2015
HIV-1 PR_Prasad_1 HIV-1 aspartyl protease (PR) 5'GGGUUACCUAGGUGUAGAUGCUCUUCAUUGUAACUUCUCAUAAUUUCCCGAGGCUUUUACUUUCGGGGUCCUAAGUGACGUCUGAACUGCUUCGAA3' 96 44.79% Kd: 115 ± 22 nM 2015
HIV-1 PR_Prasad_2 HIV-1 aspartyl protease (PR) 5'GGGUUACCUAGGAGGAGAUGCUACAUUACCUAAGUAAGAUUACGGCUUCGAGUUUAGAGACCUCUCCCUGGUAAGUGACGUCUGAACUGCUUCGAA3' 96 46.88% Kd: 93 ±19 nM 2015
HIV-1 PR_Prasad_3 HIV-1 aspartyl protease (PR) 5'GGGUUACCUAGGAGGAGAUGCUCUUAAGUGUAACUUCUCAUAACAUCCGGAGGCUUUUACUUCCGGGGACCUAAGUGACGUCUGAACUGCUUCGAA3' 96 47.92% Kd: 17 ± 3 nM 2015
HIV-1 PR_Prasad_4 HIV-1 aspartyl protease (PR) 5'GGGUUACCUAGGAGGAGAUGCUCUUAAGUGUAACUUCUCGUAAUUCCCAAGGCUUUUACCUCGGGGUCCUAAGUGACGUCUGAACUGCUUCGAA3' 94 47.87% Kd: 2.2 ± 0.2 nM 2015
HIV-1 PR_Prasad_5 HIV-1 aspartyl protease (PR) 5'GGGUUACCUAGGAGGAGAUGCUUUGACCUAAGGUAAGAUAACGGCUUCGAGUUCAGAGACCUCGCCCUGGUAAGUGACGUCUGAACUGCUUCGAA3' 95 50.53% Kd: 4.3 ± 0.2 nM 2015
CA72-4_Lau_1 Gastrointestinal cancer antigen 72–4 5'GGGUCGUGUCGGAUCCUGCGAAGGGGGGCAGAGGUUUGACGCGAGAAAGCUUCUAAGGUAACGAU3' 65 56.92% Kd: 52.7nM 2015
REase_Maher_1 KpnI isoschizomer Acc65I 5'GGGAUAUCCUUCAUGAUUCGGAAAAGCGUAACCGCGGCCAAUCAUGCAUGAAGCGUUCCAUAUUUUU3' 67 44.78% Kd: 11.6 ± 2.3 nM 2015
REase_Maher_2 KpnI isoschizomer Acc65I 5'GGGAUAUCCUUCAUGGUGUGAUUAAACGUAAUCUCAAUCGAUCAUGCAUGAAGCGUUCCAUAUUUUU3' 67 37.31% Kd: 28.7 ± 5.2 nM 2015
REase_Maher_3 KpnI isoschizomer Acc65I 5'GGGAUAUCCCUACAUGAUAAUCGGGUGAGUAAGGCCUAAACAUCAUGCAUGAAGCGUUCCAUAUUUUU3' 68 41.18% Kd: 419 ± 46.6 nM 2015
REase_Maher_4 KpnI isoschizomer Acc65I 5'GGGAUAUCCUUCAUGAUUCGGAAAAGCGUAACCGCGGCCGAUCAUGCAUGAAGCGUUCCAUAUUUUU3' 67 46.27% Kd: 18.6 ± 4.5 nM 2015
IL-6R_Hahn_1 Soluble pleiotropic cytokine interleukin-6 receptor (sIL-6R) and interleukin-6 receptor domain 3 (IL-6R D3) 5'AAUGCGAAGAAAGAGGUCUGAGACAUUCUCAACGAACUAUGAGGAAAGGGACCGUGCGAGGGUUGGGUUAGGGUUUGGAGCCACGGUCCUUCUGGAGUUGACGUUGCUU3' 109 51.38% Kd: 97.7 ± 18.3 nM 2015
IL-6R_Hahn_2 Soluble pleiotropic cytokine interleukin-6 receptor (sIL-6R) and interleukin-6 receptor domain 3 (IL-6R D3) 5'AAUGCGAAGAAAGAGGUCUGAGACAUUCUGAAGAGAGAAAGCCAGUAGAGGGAAGAGGGAUGAGGGACGUGGGAAUCUUGGUAAUCAGUCUUCUGGAGUUGACGUUGCUU3' 110 47.27% Kd: 179 ± 117 nM 2015
IL-6R_Hahn_3 Soluble pleiotropic cytokine interleukin-6 receptor (sIL-6R) and interleukin-6 receptor domain 3 (IL-6R D3) 5'AAUGCGAAGAAAGAGGUCUGAGACAUUCUUAAAAACGGCCCAUCGUUUGGCRCUGUGGGAGUGGAGGGUGGAUGGUGUUAAGCGAUUCUUCUGGAGUUGACGUUGCUU3' 107 48.60% Kd: 34.8 ± 5.8 nM 2015
UCH37_Lee_1 Proteasome‐associated deubiquitylating enzyme UCH37 5'GGGUUCACUGCAGACUUGACGAAGCUUGGAGGGCAUGCUUCGGGCAAACCUGUAGGGGUGCGGCUCUAAUGGAUCCACAUCUACGAAUUC3' 90 54.44% NA 2016
IR_Esposito_1 Glioblastoma cell line U87MG 5'GGAGACAAGAAUAAACGCUCAAUGAUUUUGCAGCACUUCUUGUUAUCUUAACGAACUGUUGAUGAUUCGACAGGAGGCUCACAACAGGC3' 89 42.70% Kd: 6 nM 2016
CCL17_Förster_1 Chemokine CCL17 5'AAUAGAGUCGUCGCGGGUUGGCUCGUAGAUCGGGCCGGUACAGACGACUCGCUGAGGAUCCGAGA3' 65 60.00% NA 2018
CCL17_Förster_2 Chemokine CCL17 5'GAGCAGCAUUUGUGGUUUCCCGAUCGCUUCCCCUAAACAGCAGACGACUCGCUGAGGAUCCGAGA3' 65 55.38% NA 2018
CCL17_Förster_3 Chemokine CCL17 5'GGGUCGUCGCGGGUUGGCUCGUAGAUCGGGCCGGUACAGACGACCCAGACGACUCGCUGAGGAUCCGAGA3' 70 65.71% Kd: 0.9 ± 0.1 nM 2018
CCL17_Förster_4 Chemokine CCL17 5'GAGCAGCAUUUGUGGUUUCCCGAUCGCUUCCC3' 32 56.25% Kd: 7.5 ± 1.5 nM 2018
Prostate cancer_Sullenger_1 Prostate cancer cell line PC-3 5'GGGAGGACGAUGCGGGGCUUUCGGGCUUUCGGCAACAUCAGCCCCUCAGCCAUUUCUCCUACUGGGAUAGGUGGAUUAU3' 79 56.96% Kd: 146-410 nM 2018
CA50_Lau_1 Homo sapien - CA50 5'GGGUCGUGUCGGAUCCGUGAGUUUUUCGCGGCGAAGACAAGGCUCGAAGCUUCUAAGGUAACGAU3' 69 48.78% Kd: 38 nM 2018
CEA_Lau_1 Homo sapien - CEA 5'AUCGUUACCUUAGAAGCUUAGGCACGACGCAUAGCCUUGGGAGCGAGGAGGAUCCGACACGACCCUAUAGUGAGUCGUAUUA3' 82 51.22% Kd: 16.5 nM 2018
CA72-4_Lau_1 Homo sapien - CA72-4 5'GGGUCGUGUCGGAUCCUGCGAAGGGGGGCAGAGGUUUGACGCGAGAAAGCUUCUAAGGUAACGAU3' 69 51.22% Kd: 52.7 nM 2018
CEA_Lau_2 Homo sapien - CEA 5'AUCGUUACCUUAGAAGCUUAACGGCAUGACCUAACCUGGAGGCGCAUCAGGAUCCGACACGACCCUAUAGUGAGUCGUAUUA3' 82 48.78% Kd: 156.0 nM 2018
CA72-4_Lau_2 Homo sapien - CA72-4 5'AUCGUUACCUUAGAAGCUUCCCAAAAAGGAUUGGGGCGUCUGCAUGACCGGAUCCGACACGACCCUAUAGUGAGUCGUAUUA3' 82 48.78% Kd: 71.2 nM 2018
CA50_Lau_2 Homo sapien - CA50 5'AUCGUUACCUUAGAAGCUUAGCUCGAAAGUGGGCUGGCGAUGUGUCCCGGGAUCCGACACGACCCUAUAGUGAGUCGUAUUA3' 82 51.22% Kd: 30.7 nM 2018
MLL1_Chun_1 Mixed lineage leukemia protein 1 (MLL1) 5'GGCUCGAGGAACGUACAGAGGGUGGAGAGUGGGUGGAAGCUUACGGUACCUAGC3' 54 59.26% NA 2019
MLL1_Chun_2 Mixed lineage leukemia protein 1 (MLL1) 5'GGCUCGAGGACGUAACAGAGGGAGGCGAGUGGGUGGAAGCUUACGGUACCUAGC3' 54 61.11% NA 2019
CD25_Weiner_1 Soluble Interleukin 2 Receptor α (CD25) 5'GGGAGGACGAUGCGGUCCUGUCGUCUGUUCGUCCCCAGACGACUCGCCCGA3' 51 66.67% Kd: 122.0 ± 5.23 nM 2019
CD25_Weiner_2 Soluble Interleukin 2 Receptor α (CD25) 5'GGGAGGACGAUGCGGCGUUUCCUCUGGUUCGUCCCCAGACGACUCGCCCGA3' 51 66.67% Kd: 96.9 ± 5.77 nM 2019
CD25_Weiner_3 Soluble Interleukin 2 Receptor α (CD25) 5'GGGAGGACGAUGCGGUGAGUCGUUCCCUUCGUCCCCAGACGACUCGCCCGA3' 51 66.67% Kd: 68.2 ± 2.73 nM 2019
CD25_Weiner_4 Soluble Interleukin 2 Receptor α (CD25) 5'GGGAGGACGAUGCGGGCCGUUGUUGUGUGCCGCCCCAGACGACUCGCCCGA3' 51 70.59% Kd: 35.7 ± 1.56 nM 2019
CD25_Weiner_5 Soluble Interleukin 2 Receptor α (CD25) 5'GGGAGGACGAUGCGGAUUCUGGUUACUGGCCGCCCCAGACGACUCGCCCGA3' 51 66.67% Kd: 46.1 ± 1.76 nM 2019
C. albicans_Bachtiar_1 C. albicans CGAAAGACCAACGCAGCCAAACUGAAGCCCCAGUCGCCCCG 41 63.41% NA 2019
C. albicans_Bachtiar_2 C. albicans AGCCCUCAACCCAGACACCCCCAACCUUCCUCGCCCCCCC 40 70.00% NA 2019
MDA-MB-231_Cerchia_1 Triple-negative breast cancer (TNBC) cell line MDA-MB-231 5'UAGGGAAGAGAAGGACAUAUGAUAAGGCCGACGUAAUGUGUCGGUCGUUACGCGUCGUGCACGUUGACUAGUACAUGACCACUUGA3' 86 48.84% Kd: 59.12 ± 12.93 or 73.02 ± 12 2020
MDA-MB-231_Cerchia_2 Triple-negative breast cancer (TNBC) cell line MDA-MB-232 5'UAGGGAAGAGAAGGACAUAUGAUCCGAUCUCACGCGCACCUUCUCUUCAGCGCGCGACUGGCAUUGACUAGUACAUGACCACUUGA3' 86 51.16% Kd: 21.91 ± 3.08 or 28.93 ± 9.72 2020
MDA-MB-231_Cerchia_3 Triple-negative breast cancer (TNBC) cell line MDA-MB-233 5'UAGGGAAGAGAAGGACAUAUGAUCGAUGCGCACCGAUCUCUCUUCUGCACGUCCUUCGGCACAUUGACUAGUACAUGACCACUUGA3' 86 48.84% Kd: 24.30 ± 4.99 or 23.92 ± 3.59 2020
MDA-MB-231_Cerchia_4 Triple-negative breast cancer (TNBC) cell line MDA-MB-234 5'UAGGGAAGAGAAGGACAUAUGAUCCUGCCCCAACCAUCGCUUCCUCGACGCGCGUUGUCGGCAUUGACUAGUACAUGACCACUUGA3' 86 52.33% Kd: 9.84 ± 1.63 or 10.77 ± 2.41 2020
MDA-MB-231_Cerchia_5 Triple-negative breast cancer (TNBC) cell line MDA-MB-235 5'UAGGGAAGAGAAGGACAUAUGAUGCAACGUUGUGGUCCCGUUUGCACUUUGUUUACGCGCGCAUUGACUAGUACAUGACCACUUGA3' 86 46.51% Kd: 17.17 ± 2.87 or 26.09 ± 3.20 2020
MDA-MB-231_Cerchia_6 Triple-negative breast cancer (TNBC) cell line MDA-MB-236 5'UAGGGAAGAGAAGGACAUAUGAUCCUCAGCGCGCAACUUCCCUCCGUUCCCUGCCACGCGUCA3' 63 57.14% Kd: 26.88 ± 3.68 or 37.36 ± 3.50 2020
DUX4_Kinter_1 Double homeobox protein 4 (DUX4) 5'AUCCAGAGUGACGCAGCUAACUUAAUCAACCGCAGGUUGAUUAGCCCAUUAGCUGGACACGGUGGCUUAGU3' 71 49.30% Kd: 20 nM 2020
Oligomers of Aβ42_Irie_1 Toxic beta-amyloid 42 dimer (Aβ42) 5'GGGACGAAGACCAACUGAACUUUGUGGUGGCGGCUACUCGUGUUCUUUUGACUUUGUCCGUGCUGCCACCUUACUUC3' 77 51.95% Kd: 20 ± 6.0 nM 2020
SARS-CoV-2_Kjems_1 SARS-CoV-2 spike protein 5'GGGGCCACCAACGACAUUUGUAAUUCCUGGACCGAUACUUCCGUCAGGACAGAGGUUGAUAUAAAUAGUGCCCAUGGAUCC3' 81 49.38% KD:~ 18 nM 2021
CD19_Catuogno_1 CD19 UGAGCCCUGUUCGACAGGAGGCUCA 25 60.00% Kd:49.9 ± 13 nM 2021
CD19_Catuogno_2 CD19 CCUGUUGUUCGACAGGAGGCUCACAACAGG 30 56.67% NA 2021
HER3_Kawakami_1 human epidermal growth factor receptor 3 (HER3) GGAUUAAGGAGGUGAUAUUUAUG-CAUUUGUAUGCUCAGUUGUUUAUCACUCUUCUU-UGCGGUGGAGGAGGAGGUAGCUA 81 40.74% Kd:700 nM 2021
IL-6R_Kawakami_1 IL-6 receptor (IL-6R) GGAUUAAGGAGGUGAUAUUUAUGUAGAUGUAGUAUUCCUACGAAGUAUUAUUCUUCUUGCGGUGGAGGAGGAGGUAGCUA 80 40.00% Kd:200 ± 200 n M 2021
Exosomes_Condorelli_1 breast cancer exosomes UGUGGCAGUUAAGAAUAGAUCUUCGCUGCGAUU 33 42.42% Kd:∼0.8 nM 2021
RCAN1_Sun_1 Regulator of calcineurin 1 (RCAN1) AUACAACAAAAACAAAAACAAGAAA 25 20.00% Kd:293 nM 2021
FGF5_Sakamoto_1 Fibroblast growth factor 5 (FGF5) GGGCUAGCUGAUCGUACCUCUCCGUACUGACCUACAGAGCGACAUACUAGUGUAUCCAGAUACUAACAGCUAACACCC 78 50.00% Kd:0.7 ± 0.2 nM 2021
FGF5_Sakamoto_2 Fibroblast growth factor 5 (FGF5) GGGCUAGCUGAUCGUACCUAGCGUGAAUCCAACACGCUUGACAUGCAAACUGCAUCCAGAUACUAACAGCUAACACCC 78 50.00% Kd:0.57 ± 0.02 nM 2021
FGF5_Sakamoto_3 Fibroblast growth factor 5 (FGF5) GGGCGACCUCUCCGUACUGACCUACAGAGCGACAUACUAGUGUAUCCAGAUCGCCC 56 57.14% Kd:0.118 ± 0.003 nM 2021
FGF5_Sakamoto_4 Fibroblast growth factor 5 (FGF5) GGGCGACCUAGCGUGAAUCCAACACGCUUGACAUGCAAACUGCAUCCAGAUCGCCC 56 57.14% Kd:0.92 ± 0.04 nM 2021
HIV-1 CA lattice_Lange_1 HIV-1 Capsid (CA) lattice tubes 5'GGAAGAAGAGAAUCAUACACAAGAUCGACGUACCUCAGGGUGGUGUAUGACUGAGGUGAAGACUGUGAACCAUGGCAUGCGGGCAUAAGGUAGGUAAGUCCAUA3' 104 48.08% Kd: 350 ± 50 nM or Kd: 502 ± 57 nM 2022
APP_Kwok_1 Amyloid precursor protein (APP) 3'UTR D-rG4 5'L-GCGGCAAGAGUGGGGGAGGGGGGUCGACGCC3' 33 72.73% Kd:24.06 ± 2.90 nM 2022
APP_Kwok_2 Amyloid precursor protein (APP) 3'UTR D-rG5 5'GCGGCAAGAGUGGGGGAGGGGGGUCGACGCC3' 33 72.73% Kd:49.23±4.89nM 2022
APP_Kwok_3 Amyloid precursor protein (APP) 3'UTR D-rG6 5'GCGGCGCCGAAGGGAGUGUGGGGGGGGGUCGACGCCG3' 39 76.92% KD:11.14±1.43 nM 2022
APP_Kwok_4 Amyloid precursor protein (APP) 3'UTR D-rG7 5'GUGGCCCGAGGUGGGCGGGAGGGACGUAGCGGCCAC3' 36 77.78% Kd:67.54±11.27 nM 2022
IL-23_Kawakami_1 IL-23 5'GGAUUAAGGAGGUGAUAUUUAUGCGUUCGACGAUGUGCAGAAUGGUUGUUUGUGCGGUGGAGGAGGAGGUAGCUA3' 75 48.00% NA 2022
Hypoxic cells_Catuogno_1 hypoxic phenotype in breast cancer (BC) cells 5'CGCUGUGUGGAUAACAUGUAGCUACACAAUUCGAACCGC3' 39 48.72% Kd:∼35 nM 2022
CD22_Thiel_1 B cell surface protein CD22 5'GGGAGGACGAUGCGGGCCAUUCGUCUUUUCGUCCCCAGACGACUCGCCCGA3' 51 64.71% NA 2023
CD22_Thiel_2 B cell surface protein CD22 5'GGGAGGACGAUGCGGUGACUCGUCUGUUUCGUCCCCAGACGACUCGCCCGA3' 51 64.71% NA 2023
LipL32_Citartan_1 LipL32 5'GGGAGGACGAUGCGGAUCCGAAGAUCGUCCUGGAGGGAAGGGAGGGUAGGCGCAGCAGACGACUCGCUGAGGAUCCGAGA3' 80 63.75% Kd:54.45 ± 9.836 nM 2023
LipL32_Citartan_2 LipL32 5'GGGAGGACGAUGCGGUAUGGGACCGCGUAAGAGUGGGAGGGGGCGGCAGGUUCAUCAGACGACUCGCUGAGGAUCCGAGA3' 80 63.75% NA 2023
Vibrio cholerae_Arab_1 V. cholerae 5'UCCUCGCAUCGGGGGUGAAGUACCGUGCGAAAGUCGACGG3' 40 62.50% NA 2023
Vibrio cholerae_Arab_2 V. cholerae 5'CGGUUUUAAGUGGCAAGGCGAUUUGCCUGGGUAGAAUCCG3' 40 52.50% NA 2023
Vibrio cholerae_Arab_3 V. cholerae 5'GCCUUGGGUAGAGGCCGGUGGGUAUCUCCAUGAGAUGCUC3' 40 60.00% NA 2023
AML1 RD_Sakamoto_1 cute myeloid leukaemia 1 (AML1) Runt domain (RD) 5'GGGACACAAUGGACGGCCCUGCCACGAUAGCGGCGCGGGAAGUAAAGUAUACACCUAACGGCCGACAUGAGAG3' 73 58.90% Kd:0.044 ± 0.003 n M 2023
AML1 RD_Sakamoto_2 cute myeloid leukaemia 1 (AML2) Runt domain (RD) 5'GGGACACAAUGGACGGCCCAGCCACCUAGAGCGAGCGCGCAAUGGAGACCCAUUGUAACGGCCGACAUGAGAG3' 73 61.64% Kd:0.011 ± 0.01 n M 2023
AML1 RD_Sakamoto_3 cute myeloid leukaemia 1 (AML3) Runt domain (RD) 5'GGGACACAAUGGACGGCCCUGCCACCUAGAGCGAGCGCGCAAUGGAGACCCAUUGUAACGGCCGACAUGAGAG3' 73 61.64% Kd:0.056 ± 0.003 n M 2023
Cardiomyocyte_Phylactou_1 cardiomyocyte 5'UGCAGGUGCAUGUGGGAUCACGCGCGGUUAGGUCGCCGCG3' 40 67.50% NA 2023
NS1 Protein_Citartan_1 dengue NS1 5'GGAGCUCAGCCUUCACUGCUUUGAUCUCGUGGGGGUGUGUCGCGGGAGACACCAUGGAAUAUAUGGCUGAUUUCAUGUGGGCACCACGGUCGGAUCCAC3' 99 56.57% Kd:37.57 ± 10.34 nM 2023
NS1 Protein_Citartan_2 dengue NS1 5'GGAGCUCAGCCUUCACUGCCGUAGUCGUAUCUCCAUUACCCAGAAUGGUGAUGCGCCGUGAAGAGCGGUUUAGGGAAUUGGCACCACGGUCGGAUCCAC3' 99 56.57% Kd:41.40 ± 9.29 nM 2023
Progesterone receptor_Citartan_1 Progesterone Receptor 5'GGAGCUCAGCCUUCACUGCUACUUGGGAGGGGAGCGAACCUUCCAGUUCGUCUCUCUUGGGAAAGGGUUUGUAGCUAAUCAGGCACCACGGUCGGAUCCAC3' 101 56.44% NA 2024
Progesterone receptor_Citartan_2 Progesterone Receptor 5'GGAGCUCAGCCUUCACUGCCUGGGGGCGGGUUGGGUUGUAUCAUUUGCCGUUAGCCUGGUACAAAAGGGAGGCACUGGAGGCACCACGGUCGGAUCCAC3' 99 60.61% NA 2024
Progesterone receptor_Citartan_3 Progesterone Receptor 5'GGAGCUCAGCCUUCACUGCUUGCUUUUGGGGGUGCCGUACGCAUUGCGGCAGGGGGAAGAGGAGGGUAGCGACCAGUCGAAGGCACCACGGUCGGAUCCAC3' 101 63.37% Kd:380 nM±35 nM 2024
Levofloxacin_Suess_1 levofloxacin 5'GGGCACUCCAAGCUAGAUCUACCGGUUUGGGUAGUGCGAUUCGCACUGAAUGCCGCGUAGGCUUCGCUACUGGCUUCUACUACGUACCCAAAAUGGCUAGCAAAGGAGAAGAACUUUUCACU3' 122 50.82% Kd:6 μM 2024
Levofloxacin_Suess_2 levofloxacin 5'GGGUUUGGGUAGUGCGAUUCGCACUGAAUGCCGCGUAGGCUUCGCUACUGGCUUCUACUACGUACCCAAACCC3' 73 56.16% Kd:6 μM 2024
IL-17RA_Kawakami_1 human interleukin-17 receptor A (IL-17RA) 5'GGAUUAAGGAGGUGAUAUUUAUGAUGAUUGUGUUUUAUCUGCAUCAUAAUGAGUGCGGUGGAGGAGGAGGUAGCUA3' 76 40.79% Kd:5 nM 2024
VβBCC_Sakamoto_1 VβBCC complex 5'gggagacaagaauaaacgcucaaUUGGAUCGAAACCAUGUAGACAUGGCCAUCCAAAGGGAGAuucgacaggaggcucacaacaggc3' 87 21.84% Kd:4.3 ± 0.1 nM 2024
VβBCC_Sakamoto_2 VβBCC complex 5'gggagacaagaauaaacgcucaaAAGUGGCCUAGUACUCGACUCOAACCUAGUAGUCUAGGGUuucgacaggaggcucacaacaggc3' 87 21.84% Kd:9.62 ± 0.02 nM 2024
VβBCC_Sakamoto_3 VβBCC complex 5'GGAGCGAAACCAUGUAGACAUGGCCCUCC3' 29 58.62% Kd:2.7 ± 0.1 nM 2024
tRip_Frugier_1 Plasmodium tRip200-402WT 5'gggagacaagaauaaacgcucaaAUGAACACCUAGUCAAGACCGUUUAuucgacaggaggcucacaacaggc3' 72 13.89% Kd:66  ± 2.2 nM 2024
tRip_Frugier_2 Plasmodium tRip200-402WT 5'gggagacaagaauaaacgcucaaGGUGAGAUAACCUGUCAGCACCUAGuucgacaggaggcucacaacaggc3' 72 18.06% Kd:71.7 ± 6.8 nM 2024
tRip_Frugier_3 Plasmodium tRip200-402WT 5'gggagacaagaauaaacgcucaaACCUGACCUACAGGUAACGCUAACAuucgacaggaggcucacaacaggc3' 72 16.67% Kd:110 ± 11.8 nM 2024
tRip_Frugier_4 Plasmodium tRip200-402WT 5'gggagacaagaauaaacgcucaaGAGAAGUCAGAUCGAAACACCUAGAuucgacaggaggcucacaacaggc3' 72 15.28% Kd:37.3 ± 9 nM 2024
MGSO-3 cells_Goes_1 MGSO-3 cells 5'GGGUUGUGUAGAUGAGGUAACUGAUGAAAAUGAUACU8uUAUACAGAAAUUAUCACUCCAGUGACGUCUGAACUGCUUCGAA3' 82 37.80% NA 2024
MGSO-3 cells_Goes_2 MGSO-3 cells 5'GGGUUGUGUAGAUGCGUCAGUAUCAUUUGGAAAUGUUUUCGUCAUGGAGGUUCCGUGACGUCUGAACUGCUUCGAA3' 76 46.05% NA 2024